Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01381 ATGCCAATCCTTCTTCAATTTATGATATCAGTTTTGATATTCCTTTTTGCGCCAGTTTTATCCCAGGTTGACCAGCTCATGTATGCAGGATTCAAGGATGTTGATCCTAACAATTTAACATTGAATGGAATTGCAGAGATAGAGAAAAATGGAATAATAAGATTAACAAATGAGACAAGCAAATTAATGGGTCATGCTTTTTACTCTCAACCTTTCCAGCTAAAGAACTCATCAACCGGTACAGGTTTTTCCTTTTCTTCATGTTTTGCTATTGCTGTTGTTCCTGAATATCCTAAACTTGGTGGTCATGGCATGGCTTTCACAATAGCACCGACAAAAGATCTCAAAGCTTTACCTATTCAGTGTCTTGGTCTTCTCAATTCAAGTAATGTTGGTAATTTCTCGAACCATCTTTTTGCTGTTGAGTTTGACACCGTTCAAGACTTTGAGTTTGGTGATATTAATGATAATCATGTTGGAATAGACATCAATAGTTTGCAGTCAAATGCATCTGTTATTGCTGGCTATTACACTGATGATTCAACCAAACAAGATCTTAATATCAAAAGTGGAAAACCAATTCTAGTTTGGGTTGATTATGATTCTTCAATGAATCTTATTAGCGTTACACTTTCTCCTACTACAACCAAACCTAAAAAACCAATTTTGTCCTTTTCTATGGATCTATCACCTATTTTTCATGATACTATGTATGTTGGATTCTCTGCTTCAACTGGTTTACTTGCTAGCTCTCATTACTTATTGGGTTGGAGCTTTAAAATTAATGGACCAGCACCACCACTTGATTTGTCGTCGCTACCACAACTTCCACAGCCAAAAAAGAAACAAACTTCTCTGATAACTGGTGTTTCAGTTATAGCTTTGGTTATTGCATTGTGTTCTATAGCATTTGGTATTTACATTTTCAGAAAAATTAAGAATGCTGATGTAATAGAAGCATGGGAGCTTGAAATTGGACCGCATAGATACTCCTATCAAGAACTCAAGAAAGCTACAAAAGGTTTTAAGGAGAAAGAGTTACTTGGGCAGGGTGGTTTCGGAAGAGTTTACAAAGGAACAATACCTAAATCAAATATACAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGTTTGAGGGAATTTGTAGCCGAAATTGCCAGCATAGGCCAGCTCCGCCACCGGAATTTGGTTCAGTTACTCGGGTGGTGTCGCCGCAGAGGCGACCTTTTACTCGTGTATGACTTCATGGCTAATGGAAGCTTAGACAAGTACTTGTTTGAGGATTCAGAAATTGTGCTAAGTTGGGAACAAAGGTTTAAGATAATAAAAGATGTTGCTTCAGGGCTTTCGTTTTTGCATGAAGGTTATGAGCAAGTGGTAATACACAGAGATGTTAAGACTAGTAATGTGCTGTTAGATTTTGAACTCAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTGTACGAACATGGTGCTAATCCCGGCACCACAAGAGTGGTGGGAACCTTGGGGTATTTGGCGCCGGAGTTGCCTAGAACAGGAAAGTCATCTACATGCTCCGACGTTTTTGCATTCGGTGCACTTCTGCTAGAGGTTGCTTGCGGAAGAAGGCCTATTGAACCTAAGGTATTACACGAAGAGTTGGTATCGGTGGAATGGGTGTGGGAAAAATACAAAGAAGAAAGAATGCTTGAAGTAGTTGATCCAAAATTGAATGGTAAGTTTGATGAAAATGAAGTAATGATGGTGTTGAAATTGGGGATGATATGCTCTAATGATGTGCCAACTATAAGGCCTAGCATGAGACAAGTAGTGAGGATTTTGGACAGAGAAGTTGAGTTGCCAAATGAATTGAGAAAGCCAGGAGGTATTGATTCTCAAGAAGGTTTTGATGAATTTTTGCATTCTCTTGGATCTTCTTCATTTGATATGACGAATTCTAGTTCCTATCTTGGAAATAGAGACATTAATATTAGTTCAATCTCTTTTGCTAATTCAACTTTGTCACTTCCCGGTGCTAGAGTAGAATGA 2043 0.3813 MPILLQFMISVLIFLFAPVLSQVDQLMYAGFKDVDPNNLTLNGIAEIEKNGIIRLTNETSKLMGHAFYSQPFQLKNSSTGTGFSFSSCFAIAVVPEYPKLGGHGMAFTIAPTKDLKALPIQCLGLLNSSNVGNFSNHLFAVEFDTVQDFEFGDINDNHVGIDINSLQSNASVIAGYYTDDSTKQDLNIKSGKPILVWVDYDSSMNLISVTLSPTTTKPKKPILSFSMDLSPIFHDTMYVGFSASTGLLASSHYLLGWSFKINGPAPPLDLSSLPQLPQPKKKQTSLITGVSVIALVIALCSIAFGIYIFRKIKNADVIEAWELEIGPHRYSYQELKKATKGFKEKELLGQGGFGRVYKGTIPKSNIQVAVKRVSHESKQGLREFVAEIASIGQLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFEDSEIVLSWEQRFKIIKDVASGLSFLHEGYEQVVIHRDVKTSNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGKSSTCSDVFAFGALLLEVACGRRPIEPKVLHEELVSVEWVWEKYKEERMLEVVDPKLNGKFDENEVMMVLKLGMICSNDVPTIRPSMRQVVRILDREVELPNELRKPGGIDSQEGFDEFLHSLGSSSFDMTNSSSYLGNRDINISSISFANSTLSLPGARVE 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01381 680 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Trre14g01381 680 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Trre14g01381 680 CDD STKc_IRAK 348 614 - -
Trre14g01381 680 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
Trre14g01381 680 PANTHER - 42 619 - -
Trre14g01381 680 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Trre14g01381 680 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01381 680 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Trre14g01381 680 Pfam Legume lectin domain 25 273 IPR001220 GO:0030246
Trre14g01381 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Trre14g01381 680 CDD lectin_legume_LecRK_Arcelin_ConA 28 263 IPR001220 GO:0030246
Trre14g01381 680 Gene3D - 25 263 - -
Trre14g01381 680 Pfam Protein tyrosine and serine/threonine kinase 344 612 IPR001245 GO:0004672|GO:0006468
Trre14g01381 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 281 IPR013320 -
Trre14g01381 680 FunFam L-type lectin-domain containing receptor kinase S.4 22 267 - -
Trre14g01381 680 SMART serkin_6 342 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01381 680 Gene3D Transferase(Phosphotransferase) domain 1 419 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01381 Trre-Chr14 12059367 12061409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01381 19 675 Receptor kinase-like Gene Family AT3G55550 57.871 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre14g01381 PK_Tyr_Ser-Thr 5.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01381 - - gmx:100784346 1016.91