Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01377 ATGTCTTCAAAACTTGTAACAATATTTTTCATGTTTGTGTCATTAGTAGCAAGTGAAGAAGATAGCAATATTAGTTTCATCTATAATGGATTCAAATCTTCACATGATTTGTATCTTGATGGTGTTGCTGATTTAACCTCAAATGGTTTACTTAGATTAACCAATGATACAAAACAACAAAAGGGTCATGCTTTCTATCCAAATCCTATAGTTTTCAACAATGGAAGTAGTAGTAGTGATATTTCATCTTTTTCAACTACTTTTGTTTTTGCTATAAGATCAGAGTTTCCTAATCTTAGTGGTCATGGAATTGTTTTTGTTTTTTCTCCTACAAAAGGGTTACCAAATTCACTACCAAGTCAATATCTTGGTGTATTCAATGAATCAAACATTGGAAAAACGGTTTTCGGTTTAGAACTTGATACAATTATGAATACTGAGTTTGATGATATCAATGATAACCATGTTGGAATTGATATCAATGGATTGAAATCAGAAAAATCAGCTTCTGCAGGATATTATGACATTGGTGATAATGAGTTCAAGAATTTGAGCCTTTTTAGTGGCTTACCAATGCAAGTTTGGTTGGAATATGATAATGGAAAGAAAAAGATTGATGTTACTTTAGCTCCAATTAATGTTGTTAAACCAAAACAACCTTTGTTAACATTATCCAAAGATCTTTCTTCAATTTTGGAAAATACTATGTATGTTGGATTTTCATCTTCAACAGGTTCAATTCTAACTTCTCATTATGTTCTTGGTTGGAGTTTTAAGGTTAATGGTCAAGCTCAAAACCTTAAAATCTCAGAACTTCCAAAGTTACCAACTTTAGATGAAAAAAATGATTCTAAGGTAATTTTGATTATTGGGTTGCCTTTGATTTCACTATGTTTGATTCTAATGGTAGCTATAGCAATGTTTCATTTCATCAAAAAGAAGAAAAAGTTTTCTGAACTTCATGAAGATTGGGAGAAAGATTATGGAACACAAAGATTCAAGTACAAAGATTTATACTTTGCAACAAATGGTTTCAAGGAGAAGGAACTATTAGGAACAGGTGGATTTGGTAGAGTCTACAAAGGTGTAATGCCAAATTCAAAACTTGAGGTAGCTGTTAAGAGAGTTTCACATGAATCAAGACAAGGAATGAAAGAATTCGTCGCGGAAATTGTTAGTATCGGTCGTCTTCGTCATAGAAATCTTGTTCCGCTTCTCGGTTATTGTAGACGAAAAGGCGAGTTACTTTTGGTTTATGATTACATGGCTAATGGAAGTTTAGACAAATATTTACACAACAAAGGACAAAGATTATTTACCTTAAATTGGAGTCAAAGGTTTAGAATCATTAAAGGTGTTGCTTCTGGTTTGTTTTATTTACATGAAGAATGGGAACAAGTTGTGGTACATAGAGATATTAAAGCTAGTAATGTTTTATTAGATTCTGAATTAAATGGTAGATTAGGTGATTTTGGTCTTTCAAGATTATATGATCATGGTACTGATCCTCAAACAACACATGTTGTTGGAACACTTGGTTATTTAGCACCAGAACATACAAGAACAGGTAAAGCTACAACAAGTTCTGATGTTTATTCTTTTGGTGCTTTTTTACTTGAAGTTGTTTGTGGTAAAAGACCTATTGAACAAAAAAGAGAATATGAGAGTGAGAGTGTAATATTAGTTGATTATGTTTATGATTGTTGGAAAAGAGGTGATATTGTTGAGGCTAAAGATGTAAATTTAAGTGATTATGTTGTTGAAGAAGTTGAATTGGTTTTGAAACTTGGTTTGTTATGTTCACATTGTGAGGCTTTGGCTAGACCAAGTATGAGACAAGTTTTAAGGTATTTAGAAAGGGATTTGTCACTTCCTGATTTGAGTTTTCTTAGTTTGAGTTCAATGGGATTAACTTCTGGACAGTGTGAGAATTTTCAAGATTTTGGTATGTCTTATGCTTCTTCTTCTATGGATAGACCATTTTCACATACTTCTTCAATTGCAGAATCACTTCTCTCTGGTGGTAGATGA 2031 0.322 MSSKLVTIFFMFVSLVASEEDSNISFIYNGFKSSHDLYLDGVADLTSNGLLRLTNDTKQQKGHAFYPNPIVFNNGSSSSDISSFSTTFVFAIRSEFPNLSGHGIVFVFSPTKGLPNSLPSQYLGVFNESNIGKTVFGLELDTIMNTEFDDINDNHVGIDINGLKSEKSASAGYYDIGDNEFKNLSLFSGLPMQVWLEYDNGKKKIDVTLAPINVVKPKQPLLTLSKDLSSILENTMYVGFSSSTGSILTSHYVLGWSFKVNGQAQNLKISELPKLPTLDEKNDSKVILIIGLPLISLCLILMVAIAMFHFIKKKKKFSELHEDWEKDYGTQRFKYKDLYFATNGFKEKELLGTGGFGRVYKGVMPNSKLEVAVKRVSHESRQGMKEFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMANGSLDKYLHNKGQRLFTLNWSQRFRIIKGVASGLFYLHEEWEQVVVHRDIKASNVLLDSELNGRLGDFGLSRLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATTSSDVYSFGAFLLEVVCGKRPIEQKREYESESVILVDYVYDCWKRGDIVEAKDVNLSDYVVEEVELVLKLGLLCSHCEALARPSMRQVLRYLERDLSLPDLSFLSLSSMGLTSGQCENFQDFGMSYASSSMDRPFSHTSSIAESLLSGGR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01377 676 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Trre14g01377 676 Gene3D Transferase(Phosphotransferase) domain 1 422 624 - -
Trre14g01377 676 SMART serkin_6 345 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01377 676 Pfam Legume lectin domain 24 273 IPR001220 GO:0030246
Trre14g01377 676 FunFam Lectin-domain containing receptor kinase A4.3 330 421 - -
Trre14g01377 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Trre14g01377 676 Pfam Protein kinase domain 345 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01377 676 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Trre14g01377 676 SUPERFAMILY Protein kinase-like (PK-like) 320 619 IPR011009 -
Trre14g01377 676 ProSiteProfiles Protein kinase domain profile. 345 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01377 676 CDD lectin_legume_LecRK_Arcelin_ConA 24 262 IPR001220 GO:0030246
Trre14g01377 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 278 IPR013320 -
Trre14g01377 676 Gene3D - 22 281 - -
Trre14g01377 676 CDD STKc_IRAK 351 620 - -
Trre14g01377 676 PANTHER - 31 622 - -
Trre14g01377 676 FunFam L-type lectin-domain containing receptor kinase V.9 23 265 - -
Trre14g01377 676 FunFam L-type lectin-domain containing receptor kinase S.4 422 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01377 Trre-Chr14 12024077 12026107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01377 23 676 Receptor kinase-like Gene Family AT2G37710 62.519 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre14g01377 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01377 - - mtr:25498550 1204.5