Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01376 ATGATAATCATTATTCTTTCCCTATTTCTTGTTTCAACGCAAAGTCAACCTCGTGGTCACATTCCATCTATAGCAATGTTTCATTTCATCAAAAAGAAGAAAAAGTTTTCTGAACTTCATGAAGATTGGGAGAAAGATTATGGAACACAAAGATTCAAGTACAAAGATTTATACTTTGCAACAAATGGTTTCAAGGAGAAGGAACTATTAGGAACAGGTGGATTTGGTAGAGTCTACAAAGGTGTAATGCCAAATTCAAAACTTGAGGTAGCTGTTAAGAGAGTTTCACATGAATCAAGACAAGGAATGAAAGAATTCGTCGCGGAAATTGTTAGTATCGGTCGTCTTCGTCATAGAAATCTTGTTCCGCTTCTCGGTTATTGTAGACGAAAAGGCGAGTTACTTTTGGTTTATGATTACATGGCTAATGGAAGTTTAGACAAATATTTACACAACAAAGGACAAAGATTATTTACCTTAAATTGGAGTCAAAGGTTTAGAATCATTAAAGGTGTTGCTTCTGGTTTGTTTTATTTACATGAAGAATGGGAACAAGTTGTGGTACATAGAGATATTAAAGCTAGTAATGTTTTATTAGATTCTGAATTAAATGGTAGATTAGGTGATTTTGGTCTTTCAAGATTATATGATCATGGTACTGATCCTCAAACAACACATGTTGTTGGAACACTTGGTTATTTAGCACCAGAACATACAAGAACAGGTAAAGCTACAACAAGTTCTGATGTTTATTCTTTTGGTGCTTTTTTACTTGAAGTTGTTTGTGGTAAAAGACCTATTGAACAAAAAAGAGAATATGAGAGTGAGAGTGTAATATTAGTTGATTATGTTTATGATTGTTGGAAAAGAGGTGATATTGTTGAGGCTAAAGATGTAAATTTAAGTGATTATGTTGTTGAAGAAGTTGAATTGGTTTTGAAACTTGGTTTGTTATGTTCACATTGTGAGGCTTTGGCTAGACCAAGTATGAGACAAGTTTTAAGGTATTTAGAAAGGGATTTGTCACTTCCTGATTTGAGTTTTCTTAGTTTGAGTTCAATGGGATTAACTTCTGGACAGTGTGAGAATTTTCAAGATTTTGGTATGTCTTATGCTTCTTCTTCTATGGATAGACCATTTTCACATACTTCTTCAATTGCAGAATCACTTCTCTCTGGTGGTAGATGA 1188 0.3359 MIIIILSLFLVSTQSQPRGHIPSIAMFHFIKKKKKFSELHEDWEKDYGTQRFKYKDLYFATNGFKEKELLGTGGFGRVYKGVMPNSKLEVAVKRVSHESRQGMKEFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMANGSLDKYLHNKGQRLFTLNWSQRFRIIKGVASGLFYLHEEWEQVVVHRDIKASNVLLDSELNGRLGDFGLSRLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATTSSDVYSFGAFLLEVVCGKRPIEQKREYESESVILVDYVYDCWKRGDIVEAKDVNLSDYVVEEVELVLKLGLLCSHCEALARPSMRQVLRYLERDLSLPDLSFLSLSSMGLTSGQCENFQDFGMSYASSSMDRPFSHTSSIAESLLSGGR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01376 395 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Trre14g01376 395 Gene3D Phosphorylase Kinase; domain 1 49 140 - -
Trre14g01376 395 FunFam Lectin-domain containing receptor kinase A4.3 49 140 - -
Trre14g01376 395 Gene3D Transferase(Phosphotransferase) domain 1 141 343 - -
Trre14g01376 395 CDD STKc_IRAK 70 339 - -
Trre14g01376 395 ProSiteProfiles Protein kinase domain profile. 64 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01376 395 FunFam L-type lectin-domain containing receptor kinase S.4 141 349 - -
Trre14g01376 395 Pfam Protein kinase domain 64 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01376 395 SUPERFAMILY Protein kinase-like (PK-like) 39 338 IPR011009 -
Trre14g01376 395 PANTHER - 25 341 - -
Trre14g01376 395 SMART serkin_6 64 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01376 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01376 Trre-Chr14 12004660 12006688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01376 28 395 Receptor kinase-like Gene Family AT2G37710 69.377 1.82e-179 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre14g01376 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01376 - - mtr:25498550 688.723