Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01370 ATGTTCCTCAATCTTGTGTTGGTGTTGTTTTTTCTTGTTACATTGGTGGCAAGTAAAGATTCTAGTTTCATCTATAATAATGGATTCCAATCATCTCATTTGTATCTTGATGGTATTGCTAATTTAACTTCCAATGGCATACTAAGACTCACCAATGACACCAAACAAGAAAAAGCACATGCATTTTATCCAAATCCTATAGTTTTCAAAAACACTTCCAATGGAAATGTGTTTTCTTTCTCAACTACTTTTGTTTTTGCTATAAGACCTCAATATCCAACTCTTAGTGGCCATGGAATTGTTTTTGTTGTTTCTCCTACAAAAGGGCTACCATATTCAAATCCAAGTCAATACCTTGGTTTATTCAATCAGACAAACAATGGAAACACAAGCAACCATGTTTTTGGTGTTGAACTTGATACTATTCAAAGTAAGGAGTTTAATGATATCAATGATAACCATGTTGGTATTGATATCAATGATTTGAAATCAGACAACTCAAATCCTGCAGGATACTATGATAATAATGGTCAATTCAAGAATTTGACCCTTTTCAGTGGCTATCCTATGCAGGTATGGATTGAATATGATAGTGAAAAGACAAAGATTGATGTTACTTTAGCTCCAATTAATGTTGTTAAACCAAAGCAACCTTTGCTATCATTGATCAAAGATCTTTCTCCAATTTTGAACAATAGTATGTATGTTGGATTTTCATCAGCTACTGGTTCAGTTTTCACTTCTCATTATATTCTTGGTTGGAGTTTTAAGGTTAATGGTGAAGCTCAAGAGCTTATAATCTCTCAACTTCCAAAGCTACCAAGATTTGGTGAGAAAAAACAGTCAAAATTTTTAACTGTTGGATTACCTTTGATTTTGCTAAGTTTGGTTTTCATGATAACTTTAGGGGTTATGTATTATATCAAAAGAAAGAATAAGTTTGCTGAGATTCTTGAAGATTGGGAACATGAATATGGACCACATAGATTTAAGTTCAAAGATTTATACTTTGCTACAAAGGGTTTCAAGGAAAAGGAGCTATTAGGAGTTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATACAAGGTTCAAAACTTGAGGTGGCTGTGAAGAGGGTGTCTCATGAATCAAGACAAGGTATGAGGGAATTCGTTTCGGAGATTGTTAGTATCGGTCGTCTTCGTCATAGGAATCTTGTTCCACTTCTCGGCTATTGTAGGCGACAAGGCGAGTTACTTTTGGTTTATGATTACATGTCTAAAGGAAGTTTAGATAATTATCTATACAACCAACCAAAAGTGACCTTGAATTGGTATCAAAGATTTAAAATCGTCAAAGGTGTTGCTTCGGGTTTGTTTTATCTTCATGAAGAGTGGGAACAAGTTGTGATTCATCGAGACATAAAAGCTAGTAATGTTTTATTAGATGCTGAATTGAATGGTAGATTAGGAGATTTTGGTCTTGCAAGGTTATATGATCATGGTGCTGATCCTCACACAACTCATTTGGTTGGAACTGTAGGGTATCTAGCTCCTGAACATACAAGAACAGGTAAAGCCACTAAATTTTCCGACGTGTTTGCTTTCGGTGCTTTTCTTCTCGAGGTCGTTTGTGGTAAGAGACCTATAGAGCATGTTGGCGAAAATGAGACTGTAATTCTAGTTGATTCTGTGTTTGAACGTTGGAAAAGTGGTGAGATTCTTGAGGCAATGGATGAAAACTTAGGATCAGATTATGTGTCTGAAGAAGTTGAATTGGTGTTGAAACTTGGTTTGTTATGTTCACATTCAGAACCTATGGCTAGACCAAGTATGAGACAAGTTGTGCAGTATTTGGAGAGGGATATACCTTTACCAGATTTGTCTTTGCTTAGTTTAACTTCTTCTGGTTTAACTTTTGGGTACCATCAAGAATTTTTTGAGGACTTTCCAATGTCATATCCATCTTCTATGGAGAAGACAATGTCACATACTTCGGTATCTATTGCTGATTCACTTCTTTCTGGTGGTCGTTGA 2016 0.3562 MFLNLVLVLFFLVTLVASKDSSFIYNNGFQSSHLYLDGIANLTSNGILRLTNDTKQEKAHAFYPNPIVFKNTSNGNVFSFSTTFVFAIRPQYPTLSGHGIVFVVSPTKGLPYSNPSQYLGLFNQTNNGNTSNHVFGVELDTIQSKEFNDINDNHVGIDINDLKSDNSNPAGYYDNNGQFKNLTLFSGYPMQVWIEYDSEKTKIDVTLAPINVVKPKQPLLSLIKDLSPILNNSMYVGFSSATGSVFTSHYILGWSFKVNGEAQELIISQLPKLPRFGEKKQSKFLTVGLPLILLSLVFMITLGVMYYIKRKNKFAEILEDWEHEYGPHRFKFKDLYFATKGFKEKELLGVGGFGRVYKGVIQGSKLEVAVKRVSHESRQGMREFVSEIVSIGRLRHRNLVPLLGYCRRQGELLLVYDYMSKGSLDNYLYNQPKVTLNWYQRFKIVKGVASGLFYLHEEWEQVVIHRDIKASNVLLDAELNGRLGDFGLARLYDHGADPHTTHLVGTVGYLAPEHTRTGKATKFSDVFAFGAFLLEVVCGKRPIEHVGENETVILVDSVFERWKSGEILEAMDENLGSDYVSEEVELVLKLGLLCSHSEPMARPSMRQVVQYLERDIPLPDLSLLSLTSSGLTFGYHQEFFEDFPMSYPSSMEKTMSHTSVSIADSLLSGGR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01370 671 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
Trre14g01370 671 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01370 671 ProSiteProfiles Protein kinase domain profile. 342 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01370 671 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01370 671 CDD STKc_IRAK 348 614 - -
Trre14g01370 671 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Trre14g01370 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 278 IPR013320 -
Trre14g01370 671 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Trre14g01370 671 CDD lectin_legume_LecRK_Arcelin_ConA 22 260 IPR001220 GO:0030246
Trre14g01370 671 PANTHER - 15 616 - -
Trre14g01370 671 Gene3D - 19 270 - -
Trre14g01370 671 SUPERFAMILY Protein kinase-like (PK-like) 317 613 IPR011009 -
Trre14g01370 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Trre14g01370 671 Pfam Legume lectin domain 21 270 IPR001220 GO:0030246
Trre14g01370 671 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Trre14g01370 671 Gene3D Transferase(Phosphotransferase) domain 1 419 623 - -
Trre14g01370 671 FunFam L-type lectin-domain containing receptor kinase V.9 20 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01370 Trre-Chr14 11971265 11973280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01370 17 671 Receptor kinase-like Gene Family AT2G37710 66.819 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre14g01370 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01370 - - gmx:100783815 991.104