Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01357 ATGCCAATAGGTAAAATGAAGCTTGATGACGATCTTGGTCCTGACCGTGAGGATCATTTTCAAACGGATGATGAAGAAAATCAAGCAGATAGAGATTTTGAAAATGATGATGAAGATTATGATAGTGAATCAGATAAAAATTCTCCTCATTCTAATGAGGTTGATTTTAATACCACATGGCCTCAAACCTATAGGACATCTATGGACATGTTAACAAGTGTAAGTGTGACACCAACTGGAATAAGTTTCCTAAAGAGAATTGGTTCAACAGGGAAAAAGGAAAATCAAGATGATTTGTATTCCAATTCTTTGACAATACCTCTTATTTATGAGGAAGAAACTTCAATCAAACAAGAGCAGTCAACTTCAACATCTCCTCTTCAATCACTTGTCAGCACTCCAAAAATCTCTGTCACTGAAATTCCACCACAGCAGAGACAATGTTCCTTTGTTCAATCAGTAATTAATGGGACCAATATATTATGTGGGATAGGACTTATGACCATTCCATATGCAGTAAAAGAAGGAGGGTTGTTGAGTCTTTCATTACTGTTATTGTTTGCTCTTATTTGTTGTTATACTGGAATTTTATTGAAGAGATGTTTGGAAAGCTACCCTGGAATCACCAGTTATCCAGATATTGGTCAGGCTGCTTTTGGAATCGTTGGTCGCTTGGGGATTGCGATAATTTTATACATGGAACTATTTGCTTCTTCTGTTGAGTTTTTAATACTTGTAAGTGATAACCTCTCATCACTTTTCCCCAACACCAGCATGACGCTAGCCGGTACAGAACTTGGTGCACATCAAGTTTTCGCCGTCACCGCAGCTCTTCTTGTTTTACCAACAGTTTGGTTGAAAAATCTAAGCCTACTTTCATATATTTCAGTTGGAGGAATATTTGCAACAATACTTGTAGCACTTTGCTTGTTTTGGCTTGGTGCAATAGACCATATTGGATATATTAATCAAGAATATAAATTCCTAGATATCGAAAACATATCGGTATCAATTGGTCTCTTTGGTTTTGGATTTGCTGGCCATGCTGTTTTTCCAAATATCTATTCATCTATGAAGGAACCATCCAAATTCCCATTAGTTCTATTTATCAGTTTTGCTTTCTGTCTTGTAATGTACCTCAGTGTAGGAATAGTTGGCTATATAATGTTTGGCGAAAAAGCCGAATCTCAGTTTACTTTAAACATGCCAAAAGAGTTATATGCATCCAAGATAGCAACATGGACAACTGTTGTGACTCCTCTTGCAAAGTATGCTTTAACATTATTGCCTATTGCTTCAAGCATAGAGGAACTTGTTCCTTCTAGGCTAAGATGTTATGCTATGTCTATTGTTATCAGAACAGTTTTGGTGATTTCATGTTTAGTTGTGGCTCTCACTTTTCCATATTTTGGTTCTGTGATGGCACTAATTGGTTCTATGATGTCAATGCTAGTTGCACTTATTTATCCTTGTGCATGTTATCTCAAGCTACATAGTGGCAGATTATCAAATATGCAGATAATAAATTGCATTTTGATTATTATTGTGGGGGTGATAAGCGCTCTGATAGGATCATACTCAGCTACTACAAGAATATCTAGTGGTGGAGACTAA 1614 0.3643 MPIGKMKLDDDLGPDREDHFQTDDEENQADRDFENDDEDYDSESDKNSPHSNEVDFNTTWPQTYRTSMDMLTSVSVTPTGISFLKRIGSTGKKENQDDLYSNSLTIPLIYEEETSIKQEQSTSTSPLQSLVSTPKISVTEIPPQQRQCSFVQSVINGTNILCGIGLMTIPYAVKEGGLLSLSLLLLFALICCYTGILLKRCLESYPGITSYPDIGQAAFGIVGRLGIAIILYMELFASSVEFLILVSDNLSSLFPNTSMTLAGTELGAHQVFAVTAALLVLPTVWLKNLSLLSYISVGGIFATILVALCLFWLGAIDHIGYINQEYKFLDIENISVSIGLFGFGFAGHAVFPNIYSSMKEPSKFPLVLFISFAFCLVMYLSVGIVGYIMFGEKAESQFTLNMPKELYASKIATWTTVVTPLAKYALTLLPIASSIEELVPSRLRCYAMSIVIRTVLVISCLVVALTFPYFGSVMALIGSMMSMLVALIYPCACYLKLHSGRLSNMQIINCILIIIVGVISALIGSYSATTRISSGGD 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01357 537 MobiDBLite consensus disorder prediction 27 42 - -
Trre14g01357 537 PANTHER OS05G0424000 PROTEIN-RELATED 156 518 - -
Trre14g01357 537 FunFam Amino acid transporter AVT1A 146 534 - -
Trre14g01357 537 MobiDBLite consensus disorder prediction 1 59 - -
Trre14g01357 537 MobiDBLite consensus disorder prediction 8 26 - -
Trre14g01357 537 Pfam Transmembrane amino acid transporter protein 147 526 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01357 Trre-Chr14 11836979 11841554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01357 6 534 Amino Acid or Auxin Permease AAAP Family AT5G02180 51.264 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01357 K15015 - cave:132161847 570.852