Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01352 ATGATTGAGTCATCAATGTCAAAGACAATGATGGAGAAAGTAATGACTTCTAATTGGTCAGAAGGGTCAGAACATCATGAACTTTTAAGGGACCTTTTAGTTGATGAATCTCCTCTACTTATGTTGCCACAAGGGACAACAAATGAAGTAACCAACACAAGTCATGATGATTCTTCAAAAGACCAAATCTTTAATAGGCTCATTTCAAATATTTATTCAGGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCACTTTCAACAAATTTCATCAACAAGAGTTTCCATATTGGAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGATGGGTGATGATGGATATAGGTGGAGGAAATATGGTCAAAAATTCATTAAAAATAGCCCAAATCCTAGGAGTTACTATAGATGCACCAACCCAAGGTGTGGTGCTAAGAAGCAAGTTGAGAGATTCATTGAAGACCCTGACACTCTTATAATCACTTATGAAGGACTCCACTTGCACTTTACTTATCCATATTTCTTAGTGGGCCAATCACATCAATCTAATTCTCATCCACCAATCAAGAAGTCAAAGCCCATTTCTTTACAAGGCCCAACCCAAATCCATAAAGCAAATGAAATTCATGATCGCCATATTATACAAGAAGCCCATAATGCTTCTTTGGGACTCTTATCACACAATTTATTGGACTCTACACAAGACAAGACCCAAGAAAATTTGGGCTCACAAGGAATGCTTGAAGACATGGTGCCATTTATGGTTAGAAACCCTACAAACAATGTTGATAGTGATTGA 846 0.3629 MIESSMSKTMMEKVMTSNWSEGSEHHELLRDLLVDESPLLMLPQGTTNEVTNTSHDDSSKDQIFNRLISNIYSGPTISDIENALLVTNHSNHFQQISSTRVSILERSLSKIENKYTLKIKCFGNGMGDDGYRWRKYGQKFIKNSPNPRSYYRCTNPRCGAKKQVERFIEDPDTLIITYEGLHLHFTYPYFLVGQSHQSNSHPPIKKSKPISLQGPTQIHKANEIHDRHIIQEAHNASLGLLSHNLLDSTQDKTQENLGSQGMLEDMVPFMVRNPTNNVDSD 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01352 281 Pfam WRKY DNA -binding domain 128 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01352 281 ProSiteProfiles WRKY domain profile. 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01352 281 SUPERFAMILY WRKY DNA-binding domain 125 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01352 281 Gene3D WRKY domain 123 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01352 281 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 59 216 IPR044810 GO:0003700
Trre14g01352 281 SMART WRKY_cls 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01352 Trre-Chr14 11779948 11782705 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01352 29 275 WRKY Transcription Factor Family AT5G43290 43.985 3.69e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g01352 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01352 - - tpra:123889134 461.07