Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01347 ATGATGGAGAAAGTAATGACTTCTACTAATTGGTCAGAAGGGTCAGAACATCATGAACTTTTAAGGGACCTTTTAGTTGATGAGTCTCCTCTACTTATGTTGCCACAAGAGGCAGTAAATGAAGTAACCAACACAAGTCATGATGATTCTTCAAAAGACCAAATCTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATTTCGGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCACTTTCAACAAATTCCATCAACAAGAGTTTCCATATTGGAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGATGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAAAAATCCATTAAAAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACAAACCCAAGATGTGGTGCTAAGAAGCAAGTTGAGAGATCCATTGAAGACCCTGACACTCTTATAATCACTTATGAAGGACTCCATTTGCATTTCACTTATCCATATTTTTTAGTAGGGCAATCACATCAATCTGTTTCCCACCCACCAATCAAGAAGTCCAAGCCCAATTCATCACAAGGCCCAACCCAAATCCATAAAGCAAATGATGTTCATGAAGACCAGCTTATACAAAAAGCCCATGAAGCCCAAACTAGTGCTTCTTCAGGACTCATACCACCCAATTCATTGGACTCTACACAAGAAAAGGCCCAAAACAATTTGTGTTCACTAGGATTGCTTGAAGACATGGTGCCACTCTTGGTTAGGAACCCCACAAACAATGTTGATACTTGA 831 0.3815 MMEKVMTSTNWSEGSEHHELLRDLLVDESPLLMLPQEAVNEVTNTSHDDSSKDQIFNRFISNIYSGPTISDIENALLVTNHSNHFQQIPSTRVSILERSLSKIENKYTLKIKCFGNGMGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSIEDPDTLIITYEGLHLHFTYPYFLVGQSHQSVSHPPIKKSKPNSSQGPTQIHKANDVHEDQLIQKAHEAQTSASSGLIPPNSLDSTQEKAQNNLCSLGLLEDMVPLLVRNPTNNVDT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01347 276 MobiDBLite consensus disorder prediction 225 248 - -
Trre14g01347 276 MobiDBLite consensus disorder prediction 190 210 - -
Trre14g01347 276 FunFam WRKY transcription factor 105 180 - -
Trre14g01347 276 SMART WRKY_cls 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01347 276 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 54 211 IPR044810 GO:0003700
Trre14g01347 276 Pfam WRKY DNA -binding domain 120 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01347 276 Gene3D WRKY domain 115 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g01347 276 ProSiteProfiles WRKY domain profile. 114 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g01347 276 SUPERFAMILY WRKY DNA-binding domain 117 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01347 Trre-Chr14 11726257 11729451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01347 21 269 WRKY Transcription Factor Family AT5G43290 44.151 2.48e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g01347 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01347 - - tpra:123889134 466.463