Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01346 ATGATGGATCCACATCTTAAAGGGTTTTGTGGTTCCACAAATGAGATCCAGTTCAGGAATCAATCTTTGTCTGTTCTTCAGAATCAGAGACTTGAAAATGGTTTTTTTGATCAAAGTAGAGAATTTGGTTCAAATTTGATACCGGCCGATACACCTTCTTCGACAACAACCTCGATTTCGACGCATGAGGAACCTTCTCCTGAGGACTGTGAATTTTCTGATTCAGTTTTGAGTTACATCAATAACATCCTTATGGAAGAAGATATGGAAGATAAAACTTGTATGCTTCAAGATTCTTTAGATCTTCAAATTGCTGAGAAATCGTTCTATGAAGTGATAGGTGAAAAGTATCCGGTTTCGCCGTTAGGAGAACCTCCAAGTCTTGGTAATCAAATTGATGGTGTTGGAGATAATAGCTTCTTTGATAGTTATGGTTCTTTTGTTGATGATGGTGATCTTAGTAGCATTTTTATGAACAATTCTTCGCGCGGAAACTTGAGGGAAGTTCAATTTCCTCATCAAGATTATCCAGTAAATAGCATTTTACAATCTTCTTATAGCTCTACAAATAGCGTAAAAAGTACCGTTGAAGGTCCTCTGGACTCTCCAGATAGTATTCTACAGGTATCAGATCAGAATATCGAGAATCAACCGATTTTGCAGTTTCAAAAGGGTGTTGAGGAGGCTAATAAGTTTCTCCCTAGTGGAAACGGTCTCTATCATAATTTTGATGTTGCCAAATTTTCGACACTAGAGCCTAAAGTGATGAAGGATGACTTATCGGTTAAGGCGGAGAAGGATGAGAGGGAGTCTTTTCTTTCTGGATCCAAGATAAGGAAGCATCCTCTTGGTGAAGAAGTGGATGTTGAAGAAAATAGAAGCATCAAGCAAGCGGCGATTTACTCAGAACCTATGTTGAGGTCAACTATGACTGATACGATCCTGCTTCATAGTTTAGGCGATGGTAAGGATTATTTTACGGCTCGTCGCGAAGCTTTGCAAATTAAGAATAATATGATAATGCTTCCAAGTAATAAATCAAAAACTCGTACTAGTGGTAAAGGACGAGGTAAAAAACAAAACGGGAAAAAGGAAGTGATTGATTTGAGAACGCTACTTATTCTTTGTGCACAAGCTGTTGCAGCAGACGACCATAAAAGCGCACATGAGTTGCTAAAGCAGATCAGGCAGCATTCGAATATTTTCGGAGATGGAAATCAGCGGTTGGCTCATATTTTTGCCGATGGCCTTGAGGCGCGTTTGGCTGGTACAGGAAGCCAAATTTATAAAGGACTAATCAGTAAAAGAACATCAGCTGCCGATTTTCTGAAAGCTTATTATCTATACCTTGCGGCTTGCCCTTTTAGGAAGATGACTAGTTTTGTCTCGAATGTCACTATAATGCGTTCTGCCGCAAGTTCAATGAGGGTCCATGTCATAGATTTTGGTATCCTGTATGGTTTCCAATGGCCTACCCTAATACAAAGACTTTCATTAAGACCTGGAGGACCGCCGAAACTTCGGATTACAGGAATAGACTTTCCACAACCTGGTTTTAGGCCTGCAGAGAGAATCATAGAAACCGGTTCGCGCTTGGCAGCGTATGCTGAATCTTTTAATGTGCCATTTGAGTATAACGCTATAGCGAAAAAATGGGAAACCATTCAGCTTGAGGAACTCAAGATCGAAAAAGATGAATACCTTGTTGTTACCTGTTTTTATCGCGGTAAAAACTTGTTGGATGAATCTGTTGTAGTAGACAGTCCAAGGAATAAAATTCTCAATTTGATAAGGAGGATCAAGCCTGATATATTCATTCATTGCATTATTAATGGAGCCTTTAATGCACCTTTCTTTGTCACTCGATTTAGGGAGGCGTTGTTTCACTTCTCTTCGCTTTTTGATATGCTTGATAGTATTGTGCCTCGTGAGGATTGGGAAAGGATGCTAATTGAGAAAGAGATATTTGGGAAGGAAGCATTGAACGTTATAGCTTGTGAAGGTTGCGAGAGAGTTGAGAGGCCAGAAACATATAGACAGTGGCAAGTTCGTATTCTCCGAGCTGGGTTTTTGCAACAGACATTTGGCAAGAACACGGTGGAAAGGGCGGTGGAGAAAGTAAAGTCTAGTTACCACAAGGATTTTGTAATCGACGAAGATGGCAAGTGGTTATTGAATGGTTGGAAAGGGCGAATCGTTTATGCGCTTTCTTGTTGGAAACCTGCTTGA 2229 0.4011 MMDPHLKGFCGSTNEIQFRNQSLSVLQNQRLENGFFDQSREFGSNLIPADTPSSTTTSISTHEEPSPEDCEFSDSVLSYINNILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPVSPLGEPPSLGNQIDGVGDNSFFDSYGSFVDDGDLSSIFMNNSSRGNLREVQFPHQDYPVNSILQSSYSSTNSVKSTVEGPLDSPDSILQVSDQNIENQPILQFQKGVEEANKFLPSGNGLYHNFDVAKFSTLEPKVMKDDLSVKAEKDERESFLSGSKIRKHPLGEEVDVEENRSIKQAAIYSEPMLRSTMTDTILLHSLGDGKDYFTARREALQIKNNMIMLPSNKSKTRTSGKGRGKKQNGKKEVIDLRTLLILCAQAVAADDHKSAHELLKQIRQHSNIFGDGNQRLAHIFADGLEARLAGTGSQIYKGLISKRTSAADFLKAYYLYLAACPFRKMTSFVSNVTIMRSAASSMRVHVIDFGILYGFQWPTLIQRLSLRPGGPPKLRITGIDFPQPGFRPAERIIETGSRLAAYAESFNVPFEYNAIAKKWETIQLEELKIEKDEYLVVTCFYRGKNLLDESVVVDSPRNKILNLIRRIKPDIFIHCIINGAFNAPFFVTRFREALFHFSSLFDMLDSIVPREDWERMLIEKEIFGKEALNVIACEGCERVERPETYRQWQVRILRAGFLQQTFGKNTVERAVEKVKSSYHKDFVIDEDGKWLLNGWKGRIVYALSCWKPA 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01346 742 MobiDBLite consensus disorder prediction 42 71 - -
Trre14g01346 742 MobiDBLite consensus disorder prediction 42 63 - -
Trre14g01346 742 ProSiteProfiles GRAS family profile. 360 740 IPR005202 -
Trre14g01346 742 Pfam GRAS domain family 369 740 IPR005202 -
Trre14g01346 742 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 287 733 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01346 Trre-Chr14 11717410 11719638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01346 68 741 GRAS Transcription Factor Family AT2G37650 52.471 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre14g01346 GRAS 9.6e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01346 - - ccaj:109816616 1092.03