Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01332 ATGCTGAGAAGAAAACCTAAAGATCATGGAAAGAAAATACGAAGGTTGATTGGTGATGCTGCTAAGAATCAAACTTACGCCAACCCTGAAAACACTGTCTTTGATGCTAAGAGATTAATTGAAAGTGAAAAGATCAACAATGCAATTACTGTTTCCATGAATTTGCTTGATAAGAATAATCAACAGAAAGAAATTGATGTTCTTGAGGGTCATCTGAAACAGCTGGATAGCATGTTTGAAAACCTTAAAGCCAAGACCGGCTAG 264 0.3636 MLRRKPKDHGKKIRRLIGDAAKNQTYANPENTVFDAKRLIESEKINNAITVSMNLLDKNNQQKEIDVLEGHLKQLDSMFENLKAKTG 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01332 87 SUPERFAMILY Actin-like ATPase domain 14 76 IPR043129 -
Trre14g01332 87 Coils Coil 58 85 - -
Trre14g01332 87 Pfam Hsp70 protein 11 66 IPR013126 GO:0005524|GO:0140662
Trre14g01332 87 Gene3D - 9 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01332 Trre-Chr14 11491382 11497314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01332 15 40 Calmodulin-binding Proteins AT1G16030 84.615 1.03e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01332 K09490 - tpra:123904415 68.1662