Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01327 ATGGGTAACAGAATCAGCAGCCTCTGCCTCTGTTCTGCCGGTGCCGGAGAAATCTCCGGCAGGTTATATAATAGCTTTGCCTTGTTGTCCAAGAAACATGACAAAGCTATTTGTAACTCCATCTCCTATGTTAGACCGAACCCACCTGGATTCTCCGGCGATACATTCTCGGAAGAGGACGATGATACTCTAGTGACTTTCCGGTCTGTTTTCGGAGCCACGGTGAGTGCAAACTCCTCATCAACATCTTCCATTTTCCTTGATGACTCTCTTCAACACAGCACTGTTTTGGATTCCTCTGCTTCATTTGAAAGCTTTGGTTCATTCACTTCCACAATGATGCATCCTCAACATCAGAATGATCCTCCTCGTAGTTCTTCTGTGTGTGGATCCATTGAAAAAGGGTTATCTTGGAGTCCTTTTAATCCTATGTTCAATGATGATGATGATGATGTTGACTCCATTGAAAAAGCTTCAGAACATGTGAAGATAAAGAAGCCTAATAAGATCAGCTTGAAGAAGGTTCTAAGTAGAGTTTTTTCAAATACAATATCTTCTGAAAAAGGATCAATTTTTAAGAATAGTGATAATGTTGATGCAAATGCAAATGCAAGAGTGAGTTGTAGTACTAGTTTGAGTGATGAATTGAGATTGCATAATAATAACTATTTGGATGATTATGATGATGATGGTGGATATGGATGTGAGAATCTTCATATGGCTCAAGGAAAAGGCGGTGAGGATCGTATGCATATTGTGATTTGCGAGGAACATGGATGGGTTTATGTAGGAATTTATGATGGATTTAATGGTCCTGATGCAACTGATTATCTTCTTAATAATATGTTTTATGCAGTACATGATGAGCTTAAAGGGTTTCTATGTAATCGAAATCGAAATAGTAGTAATAAATTGAAAAGTGAAGATGTGTTAGAAGCTCTTTCTGAGGCAATGAGGAAAACTGAGGATGCATTTTTGAAGATAATTAATGAGATGATTAATCATAATCCTGTTTTAGCTATGATGGGATCTTGTGTTTTGGTTATGTTGATGAAAGGTGAAGATGTTTATTTGATGAATGTTGGTGATAGTCGCGCTGTTTTAGCTACTCGGATTGGGAATCATCCTCAACTCACCATGGATCATAGCACTCATGTGAAAGAGGAGGTTTATAGAATCAGACAGGAGCATCCAGATGATCCTTCTGCGGTAACTAAAGGCCGAGTGAAAGGTTACTTGAATATCACAAGGGCTTTTGGAGCAGGATTCCTTAAGCAGCCTAAACAAAATGATGCAATGTTAGAGACTTTCAAAGTTAACTACATAGGAGAATCTCCTTATATCATATGCTCCCCTTCATTACACCACCAAAGGCTCAGCTCAAGTGACAAATTTCTTATACTGTCTTCTGATGGACTTTACCAATATTTCACAAATGAAGAAGCAGTTGCTAAAGTAGAGTCATTCATCACCATGTTTCCAGATAAAAATCCAGCACAACTTCTCATTGAAGAAGCACTTAGTCAAGCAGCTAAAAAAGCCGGTATGGAGTTCCATGAGTTGCTTGATATACCACAAGGGGAAAGAAGGCTATACCATGATGACATTTCCATTGTCATAATATCCTTGGAGGGAAAAATATGGCGTTCATTAGTGTAA 1659 0.3846 MGNRISSLCLCSAGAGEISGRLYNSFALLSKKHDKAICNSISYVRPNPPGFSGDTFSEEDDDTLVTFRSVFGATVSANSSSTSSIFLDDSLQHSTVLDSSASFESFGSFTSTMMHPQHQNDPPRSSSVCGSIEKGLSWSPFNPMFNDDDDDVDSIEKASEHVKIKKPNKISLKKVLSRVFSNTISSEKGSIFKNSDNVDANANARVSCSTSLSDELRLHNNNYLDDYDDDGGYGCENLHMAQGKGGEDRMHIVICEEHGWVYVGIYDGFNGPDATDYLLNNMFYAVHDELKGFLCNRNRNSSNKLKSEDVLEALSEAMRKTEDAFLKIINEMINHNPVLAMMGSCVLVMLMKGEDVYLMNVGDSRAVLATRIGNHPQLTMDHSTHVKEEVYRIRQEHPDDPSAVTKGRVKGYLNITRAFGAGFLKQPKQNDAMLETFKVNYIGESPYIICSPSLHHQRLSSSDKFLILSSDGLYQYFTNEEAVAKVESFITMFPDKNPAQLLIEEALSQAAKKAGMEFHELLDIPQGERRLYHDDISIVIISLEGKIWRSLV 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01327 552 SUPERFAMILY PP2C-like 245 544 IPR036457 -
Trre14g01327 552 CDD PP2Cc 246 543 IPR001932 -
Trre14g01327 552 ProSiteProfiles PPM-type phosphatase domain profile. 232 543 IPR001932 -
Trre14g01327 552 Gene3D - 213 549 IPR036457 -
Trre14g01327 552 PANTHER PROTEIN PHOSPHATASE 2C 201 541 IPR015655 GO:0004722|GO:0006470
Trre14g01327 552 SMART PP2C_4 231 541 IPR001932 -
Trre14g01327 552 Pfam Protein phosphatase 2C 286 512 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01327 Trre-Chr14 11447848 11450638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01327 1 552 PP2C-type Phosphatase Gene Family AT1G07630 42.750 3.68e-166 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01327 - - dcr:108210844 468.774