Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01325 ATGCCTCCTTTTCATATATCCAACACCAACACCCTTCGCCTTCGCAATTTTTTCATCTTATTCAGAAAAGAGTTTGCATTTGTCGCATTCGCTTTCTTCCTTCTTTTCTCTTTCGCTTTTCTCACTCGATCCAATAATCCACACTCTCACTCTCATCATGATGACTCTCAATCCAATTCCATCCTCATTCCATTCACCTCTCTCACCAACTTCAAACAAATTGGCGCACTTTGTTTGGATGGCAGTTCTCCTGGTTACCATTTCCAAAAGGGTTTTGGATCCGGATCTCATAATTGGCTGCTTCACGTTGAGGGAGGAGGGTGGTGCAATTCAATAGCGTCCTGTTCTTATAGAAAAATGACTGCTTTGGGATCATCCAAGTATATGGATACATCGGTTCCTTTTTCAGGGATACTAAGCTCTGTTCCTTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCCTTTGCTGGTCACCCAGAAAGTGAGCAGAAAGGAAGCGGGTTGTTCTTCAGAGGCCAGATCATATGGGAAGCTATTATGAATGAATTATTATCAATTGGAATGTCTAAAGCGAAACAGGCCTTGTTGTCAGGATGCTCAGCTGGAGGATTGGCAACTCTTATACATTGTGATAACTTCCGAAAATTACTTCCGAAGGAGGCCAATGTCAAGTGTCTCGCGGATGCAGGCTTCTTCCTTGATGAGAAGGATATTCTCGGAAATAGCACAATGAGATCTTTCTATCATGATGTTGTCCAGCTCCAGGGTGTTGAAAAAAGTTTGCACAAAGAGTGCCTTGCTAAAATGGAACCATCTAAGTGTCTCTTTCCATCAGAAATTCTGAAAAATGTTAAGACTCCTGTTTTCCTTGTTCATCCGGCTTATGATTTTTGGCAGATACACAATATTTTGGTACCTCAAGGATCAGATCCCCATCGTCGCTGGAAAAGATGCAGATTGAACATTCACAATTGTGATGCTAACCTGATTCCTAAACTTGACAGTTTCCGTAGTTCTTTGCTGAAGACTTTAAATGAATTCCAGCAACGAAAGGATATTGGAATGTTTATAGATTCCTGCTTTATCCATTGCCAGACTTGGATGGGTGAGACATGGCATTCACCTACTTCTCCAAAAATAAAAGATAAGACAATTGCCGAATCTGTTGCCGATTGGTTCTTTGATCGACAAGTGATAAATCTTATTGATTGCCCTTATCCATGTAATCCTACTTGCCATAATATGGATTTCAGCAGAGGATAA 1293 0.4084 MPPFHISNTNTLRLRNFFILFRKEFAFVAFAFFLLFSFAFLTRSNNPHSHSHHDDSQSNSILIPFTSLTNFKQIGALCLDGSSPGYHFQKGFGSGSHNWLLHVEGGGWCNSIASCSYRKMTALGSSKYMDTSVPFSGILSSVPSQNPDFFNWNKVKIRYCDGASFAGHPESEQKGSGLFFRGQIIWEAIMNELLSIGMSKAKQALLSGCSAGGLATLIHCDNFRKLLPKEANVKCLADAGFFLDEKDILGNSTMRSFYHDVVQLQGVEKSLHKECLAKMEPSKCLFPSEILKNVKTPVFLVHPAYDFWQIHNILVPQGSDPHRRWKRCRLNIHNCDANLIPKLDSFRSSLLKTLNEFQQRKDIGMFIDSCFIHCQTWMGETWHSPTSPKIKDKTIAESVADWFFDRQVINLIDCPYPCNPTCHNMDFSRG 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01325 430 PANTHER NOTUM-RELATED 63 425 IPR004963 GO:0016787
Trre14g01325 430 Pfam Pectinacetylesterase 57 407 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01325 Trre-Chr14 11440864 11446010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01325 28 394 Carbohydrate Esterase AT3G09410 61.957 1.15e-168 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01325 K19882 - gmx:100792819 637.876