Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01324 ATGCCTCCTTTTCATATATCCAACACCAACACCCTTCGCCTTCGCAATTTTTTCATCTTATTCAGAAAAGAGTTTGCATTTGTCGCATTCGCTTTCTTCCTTCTTTTCTCTTTCGCTTTTCTCACTCGATCCAATAATCCACACTCTCACTCTCATCATGATGACTCTCAATCCAATTCCATCCTCATTCCATTCACCTCTCTCACCAACTTCAAACAAATTGGCGCACTTTGTTTGGATGGCAGTTCTCCTGGTTACCATTTCCAAAAGGGTTTTGGATCCGGATCTCATAATTGGCTGCTTCACGTTGAGGGAGGAGGGTGGTGCAATTCAATAGCGTCCTGTTCTTATAGAAAAATGACTGCTTTGGGATCATCCAAGTATATGGATACATCGGTTCCTTTTTCAGGGATACTAAGCTCTGTTCCTTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCCTTTGCTGGTCACCCAGAAAGTGAGCAGAAAGGAAGCGGGTTGTTCTTCAGAGGCCAGATCATATGGGAAGCTATTATGAATGAATTATTATCAATTGGAATGTCTAAAGCGAAACAGGCCTTGTTGTCAGGATGCTCAGCTGGAGGATTGGCAACTCTTATACATTGTGATAACTTCCGAAAATTACTTCCGAAGGAGGCCAATGTCAAGTGTCTCGCGGATGCAGGCTTCTTCCTTGATGAGAAGGATATTCTCGGAAATAGCACAATGAGATCTTTCTATCATGATGTTGTCCAGCTCCAGGGTGTTGAAAAAAGTTTGCACAAAGAGTGCCTTGCTAAAATGGAACCATCTAAGGCAGAAATTCTGAAAAATGTTAAGACTCCTGTTTTCCTTGTTCATCCGGCTTATGATTTTTGGCAGATACACAATATTTTGGTACCTCAAGGATCAGATCCCCATCGTCGCTGGAAAAGATGCAGATTGAACATTCACAATTGTGATGCTAACCTGATTCCTAAACTTGACAGTTTCCGTAGTTCTTTGCTGAAGACTTTAAATGAATTCCAGCAACGAAAGGATATTGGAATGTTTATAGATTCCTGCTTTATCCATTGCCAGACTTGGATGGGTGAGACATGGCATTCACCTACTTCTCCAAAAATAAAAGATAAGACAATTGCCGAATCTGTTGCCGATTGGTTCTTTGATCGACAAGTGATAAATCTTATTGATTGCCCTTATCCATGTAATCCTACTTGCCATAATATGGATTTCAGCAGAGGATAA 1281 0.4091 MPPFHISNTNTLRLRNFFILFRKEFAFVAFAFFLLFSFAFLTRSNNPHSHSHHDDSQSNSILIPFTSLTNFKQIGALCLDGSSPGYHFQKGFGSGSHNWLLHVEGGGWCNSIASCSYRKMTALGSSKYMDTSVPFSGILSSVPSQNPDFFNWNKVKIRYCDGASFAGHPESEQKGSGLFFRGQIIWEAIMNELLSIGMSKAKQALLSGCSAGGLATLIHCDNFRKLLPKEANVKCLADAGFFLDEKDILGNSTMRSFYHDVVQLQGVEKSLHKECLAKMEPSKAEILKNVKTPVFLVHPAYDFWQIHNILVPQGSDPHRRWKRCRLNIHNCDANLIPKLDSFRSSLLKTLNEFQQRKDIGMFIDSCFIHCQTWMGETWHSPTSPKIKDKTIAESVADWFFDRQVINLIDCPYPCNPTCHNMDFSRG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01324 426 Pfam Pectinacetylesterase 57 403 IPR004963 GO:0016787
Trre14g01324 426 PANTHER NOTUM-RELATED 63 421 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01324 Trre-Chr14 11440864 11446010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01324 28 390 Carbohydrate Esterase AT3G09410 61.141 7.06e-163 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01324 K19882 - gmx:100792819 620.928