Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01323 ATGCCTCCTTTTCATATATCCAACACCAACACCCTTCGCCTTCGCAATTTTTTCATCTTATTCAGAAAAGAGTTTGCATTTGTCGCATTCGCTTTCTTCCTTCTTTTCTCTTTCGCTTTTCTCACTCGATCCAATAATCCACACTCTCACTCTCATCATGATGACTCTCAATCCAATTCCATCCTCATTCCATTCACCTCTCTCACCAACTTCAAACAAATTGGCGCACTTTGTTTGGATGGCAGTTCTCCTGGTTACCATTTCCAAAAGGGTTTTGGATCCGGATCTCATAATTGGCTGCTTCACGTTGAGGGAGGAGGGTGGTGCAATTCAATAGCGTCCTGTTCTTATAGAAAAATGACTGCTTTGGGATCATCCAAGTATATGGATACATCGGTTCCTTTTTCAGGGATACTAAGCTCTGTTCCTTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCCTTTGCTGGTCACCCAGAAAGTGAGGTTAGAAAAGGAAGCGGGTTGTTCTTCAGAGGCCAGATCATATGGGAAGCTATTATGAATGAATTATTATCAATTGGAATGTCTAAAGCGAAACAGGCCTTGTTGTCAGGATGCTCAGCTGGAGGATTGGCAACTCTTATACATTGTGATAACTTCCGAAAATTACTTCCGAAGGAGGCCAATGTCAAGTGTCTCGCGGATGCAGGCTTCTTCCTTGATGAGAAGGATATTCTCGGAAATAGCACAATGAGATCTTTCTATCATGATGTTGTCCAGCTCCAGGGTGTTGAAAAAAGTTTGCACAAAGAGTGCCTTGCTAAAATGGAACCATCTAAGTGTCTCTTTCCATCAGAAATTCTGAAAAATGTTAAGACTCCTGTTTTCCTTGTTCATCCGGCTTATGATTTTTGGCAGATACACAATATTTTGGTACCTCAAGGATCAGATCCCCATCGTCGCTGGAAAAGATGCAGATTGAACATTCACAATTGTGATGCTAACCTGATTCCTAAACTTGACAGTTTCCGTAGTTCTTTGCTGAAGACTTTAAATGAATTCCAGCAACGAAAGGATATTGGAATGTTTATAGATTCCTGCTTTATCCATTGCCAGACTTGGATGGGTGAGACATGGCATTCACCTACTTCTCCAAAAATAAAAGATAAGACAATTGCCGAATCTGTTGCCGATTGGTTCTTTGATCGACAAGTGATAAATCTTATTGATTGCCCTTATCCATGTAATCCTACTTGCCATAATATGGATTTCAGCAGAGGATAA 1296 0.4074 MPPFHISNTNTLRLRNFFILFRKEFAFVAFAFFLLFSFAFLTRSNNPHSHSHHDDSQSNSILIPFTSLTNFKQIGALCLDGSSPGYHFQKGFGSGSHNWLLHVEGGGWCNSIASCSYRKMTALGSSKYMDTSVPFSGILSSVPSQNPDFFNWNKVKIRYCDGASFAGHPESEVRKGSGLFFRGQIIWEAIMNELLSIGMSKAKQALLSGCSAGGLATLIHCDNFRKLLPKEANVKCLADAGFFLDEKDILGNSTMRSFYHDVVQLQGVEKSLHKECLAKMEPSKCLFPSEILKNVKTPVFLVHPAYDFWQIHNILVPQGSDPHRRWKRCRLNIHNCDANLIPKLDSFRSSLLKTLNEFQQRKDIGMFIDSCFIHCQTWMGETWHSPTSPKIKDKTIAESVADWFFDRQVINLIDCPYPCNPTCHNMDFSRG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01323 431 PANTHER NOTUM-RELATED 63 426 IPR004963 GO:0016787
Trre14g01323 431 Pfam Pectinacetylesterase 57 408 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01323 Trre-Chr14 11440864 11446010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01323 28 395 Carbohydrate Esterase AT3G09410 61.685 2.39e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01323 K19882 - gmx:100792819 631.713