Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01321 ATGTCTCCACCAGGTTCATCAAGATGGAGCCCTACAACTGAACAGCTTATGATTTTAGAAGAACTGTATAGAAGTGGAATTAGAACTCCTAGTGCTTCTCAAATTCAGCAAATAACAACTCATCTTTCTTTCTATGGTAGAATTGAAGGAAAAAATGTTTTCTATTGGTTTCAGAATCATAAAGCTAGGGATAGACAGAAACTTAGAAGGAAACTTAACAAACAACTGCAGCTACAGCAACAACAACATCAAACACAAGTTCATCATTATCAACTCAATCATGATAATATGATTAGTAACCATTTTGTTGGTACTACTTTTGGTTACCCTTTTGGATCTAATGCACAACACTTTTCATTTTTTAACTCACCTAGCTTGCTTTTTGAGGGATCAATAGCTGCAAACACATCACAAGGAGCAATGAATTGCAAATGGATCAATGGTTATAATAATAACCATCAAAGTTTGGTGGAGAAGAAAGATATTGCATTAAGCAACTATGGTTTGAAACTTAAGGATAATGTTAATCATGAACCAACTTCATGTTACACTAAACCTCTCAAGACTCTTGATCTCTTTCCACTCACAACAACAAGAATAAAAGAAGACTAG 612 0.3431 MSPPGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQHQTQVHHYQLNHDNMISNHFVGTTFGYPFGSNAQHFSFFNSPSLLFEGSIAANTSQGAMNCKWINGYNNNHQSLVEKKDIALSNYGLKLKDNVNHEPTSCYTKPLKTLDLFPLTTTRIKED 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01321 203 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 201 IPR044555 GO:0003700|GO:0099402
Trre14g01321 203 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Trre14g01321 203 SUPERFAMILY Homeodomain-like 7 67 IPR009057 -
Trre14g01321 203 CDD homeodomain 8 67 IPR001356 GO:0003677
Trre14g01321 203 SMART HOX_1 4 71 IPR001356 GO:0003677
Trre14g01321 203 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Trre14g01321 203 FunFam WUSCHEL-related homeobox 4 6 73 - -
Trre14g01321 203 Gene3D - 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01321 Trre-Chr14 11421911 11423060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01321 1 74 Wox Gene Family AT2G28610 83.784 2.65e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trre14g01321 Homeodomain 6.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01321 - - gmx:102663963 239.58