Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01316 ATGCCTTCACAAGATCAAGCACATGGTAGTGAGGTTGAACATGATGTTGGAGATGAAGCGAATGTTGCTGAAGATGAAGAGAATGTTGCTGAAGATGAAGAAAATGTTGTTGAAGATGAAGATGGTGATGATGATGGACAGGCACCTGTGGTTCCTGAAGACGAGAAGGAAAATCTGTGCTTATATGGATTACTGAATGAGAAGTGGGAAGTGAATTTACCTGTTGAAGAAGTTCCACCAGAGCTTCCTGAACCTGTGCTGGGCATCAACTTTGCTAGGGATGGGATGCAAGAGAAACACTGGCTATCTTTAGTTGCTGTTCATAGTGATACATGGTTACTTTCCCTAGCATTCTACTTTGGAGCCAGATTTTCATTTGATAAAACTGACAGGTATTCTATATGTTGGAATGAATGTTGCTTACATGAAGTCACCCTTGGAACTACTGGAAGAAAGCAAGGTACATATGCAAAAGGGGAACTTTATCCATCAACGGAGTCGTCTTTATGCAAGTATGCGGTCAATTTGTACTTAGACCTAGACCTGGTGGATACATAG 558 0.414 MPSQDQAHGSEVEHDVGDEANVAEDEENVAEDEENVVEDEDGDDDGQAPVVPEDEKENLCLYGLLNEKWEVNLPVEEVPPELPEPVLGINFARDGMQEKHWLSLVAVHSDTWLLSLAFYFGARFSFDKTDRYSICWNECCLHEVTLGTTGRKQGTYAKGELYPSTESSLCKYAVNLYLDLDLVDT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01316 185 MobiDBLite consensus disorder prediction 1 53 - -
Trre14g01316 185 Pfam Alfin 54 133 IPR021998 GO:0006355|GO:0042393
Trre14g01316 185 MobiDBLite consensus disorder prediction 18 50 - -
Trre14g01316 185 PANTHER CPG BINDING PROTEIN 54 134 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01316 Trre-Chr14 11385171 11390934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01316 55 147 Alfin-like Transcription Factor Family AT5G20510 68.750 7.82e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01316 K26274 - jre:109008877 130.954