Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01263 ATGAATAATATGGATTTAACATTCACACTGTTTCTTCTATTATTATTATTAGCCTTTTCATTACAATGTTCATATTCTTCATCATCATCACTTAGAAAAGGTTCATCCCTCTCAGTAGAAAATCCAGAAGATAAAATCATTTCACAAAATGGCATGTTCTCTTCTGGCTTTATTTCCATTGGTGAAAATGCTTATTCCTTTGCCATATGGTTCACAGAACCAAATTCCCTCAACCACAAAAACACAATCGTTTGGATGGCGAATCGCGATGAACCCGTTAACGGAAAACGATCAAAACTCACCCTTTTAAACACAGGAAACATTGTCTTGCTTGATGTTTCTTTAAACAATGTTTGGTCTTCAAACACAGCATCATTGGAACCATTGGTGTTGTATCTCAAAGATGATGGAAATCTTGTGTTGCGTGAGCTTCAAGGAACCAAAATTTTGTGGCAGAGTTTTGATTCTCCAACAGATACTCTTGTTCCTGGTCAACCCCTTACAAGATATACAAAGCTTGTAGCTTCAAGAAGTGAGACTAATCATTCTTCTGGCTTCTACATGTTCTTCTTTGATGATGAAAATATTCTCGGTCTTCATTACAACGGTCGTGATGTTTCTAGCTCTTATTGGCCAAAACCTTGGCTTCTAAGTTGGGATGTTGGCAGATCTAATTTCAATAGTAGCAGAATTGCAGTGTTAGATTCTTTTGGTGAGTTATATTCATCAGATAATTTCACTTTTACAACTTCTGATTATGGATCTGTTATGCAAAGAATAATGAAATTAGATTCAGATGGTATTGTGAGAGTTTATAGCAGAATTAATGCTTCACATAGTTGGTATGTTTCATGGCAAGCCTTTTCTGGTACTTGCACAGTTCATGGAATTTGTGGAGCTAATAGTACATGTAGTTATAGTCCTAAACTTGGAAGAAAGTGCTCTTGTATTCCAGGGTATAGAATGAAGAATCCTAATGATTGGTCTTATGGTTGTGAGCCTATGTTTGATTTCACTTGTAACAAAAGTGAGTCAACATTCTTAGAATTGAAAAATGTTGAGTTTTATGGATATGATATTCATTATATTGAAATTTCTAACTTCAGTGCTTGTGTGGATTTATGCTTAAAAGATTGTAATTGTAAAGCATTTCAACACTCATATTGGGAGAGAAAAGGCTTATATAGATGTTTTACAAAAACACAATTGCAAAATGGAAGATATTATCCCGTCTTCGAAGGATCTACCTATTTGAGATTGCCTAAAGGTAATTCATTTTCTATGAAACAAACTTCCAATCCAAGCAACAATGTTTGTTCAGAAAAACTTCAACGAGTTTATGTCAACGAAGGTGAGAATCATTTTGTGAAGTTTTTTCTATGGTTTGCCACTGCGATTGGAGTTTTCCAAATGGTCTCCATTTTTGTCATTTGGTGTTCCTTATTTAGGACGAACCAAAAGACTTATGCAGACCAACAGGGCTACCATCTAGCGGATATTGGGTTTAGGAAATTCAGTTACTTGGAGCTGAAGAAAGCAACAAAAGGGTTCAGTCAAGAGATCGGAAGAGGCGGAGGAGGTGTTGTATACAAAGGCCTGTTATCTGATGAAAGACATGCTGCAATAAAGAGACTTTACAATGCTCAGCAAGGAGAAGGCGAGTTTCTTGCTGAAGTAGGAATCATCGGAAGGCTTAATCACATGAATCTGATCGAGATGTGGGGATATTGTGCCGAGGGAAAATATAGACTATTAGTTTATGAGTATATGGAAAATGGTTCTTTAGCTGAAAATCTATCATCTAATAAACTTGATTGGAGTAAAAGGTATAAAATTGCTTTAGCAATAGCAAGAGTTTTAGCATATCTTCATGAAGAATGCTTGGAGTGGATTTTACATTGTGATATAAAGCCACAAAACATACTTCTTGATGCTAACTTTCAACCCAAGTTAGCTGATTTTGGATTGTCTAAGCTCCAAAACAGAAATAACCTCAACAATTCGAGTGTGTCTATGATCAGAGGAACAAGAGGGTATATGGCACCTGAATGGATTTTCAATTTGCCAATAACATCTAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGATAACAGGAAAAAGTCCAACTACAGGTTTTAAAATTATTAATGGAGAAAAGGAATGTGATGGAAGGTTGGTTACATGGGTGAGAGAGAAAAGAGGAAGTAGCATATCTTGGTTGGAGGAAATTGTTGATCCTAATATTGGATTAAATTATGATAAAAGTAAGATGGAGATTTTAACTGAAGTTGCTTTGGAATGTGTTGTGGATGAAAGAGATTCAAGGCCTACTATGAGTAGAGTTGTTGAGATGCTTCAATACCATGGAAATGATTGA 2388 0.3555 MNNMDLTFTLFLLLLLLAFSLQCSYSSSSSLRKGSSLSVENPEDKIISQNGMFSSGFISIGENAYSFAIWFTEPNSLNHKNTIVWMANRDEPVNGKRSKLTLLNTGNIVLLDVSLNNVWSSNTASLEPLVLYLKDDGNLVLRELQGTKILWQSFDSPTDTLVPGQPLTRYTKLVASRSETNHSSGFYMFFFDDENILGLHYNGRDVSSSYWPKPWLLSWDVGRSNFNSSRIAVLDSFGELYSSDNFTFTTSDYGSVMQRIMKLDSDGIVRVYSRINASHSWYVSWQAFSGTCTVHGICGANSTCSYSPKLGRKCSCIPGYRMKNPNDWSYGCEPMFDFTCNKSESTFLELKNVEFYGYDIHYIEISNFSACVDLCLKDCNCKAFQHSYWERKGLYRCFTKTQLQNGRYYPVFEGSTYLRLPKGNSFSMKQTSNPSNNVCSEKLQRVYVNEGENHFVKFFLWFATAIGVFQMVSIFVIWCSLFRTNQKTYADQQGYHLADIGFRKFSYLELKKATKGFSQEIGRGGGGVVYKGLLSDERHAAIKRLYNAQQGEGEFLAEVGIIGRLNHMNLIEMWGYCAEGKYRLLVYEYMENGSLAENLSSNKLDWSKRYKIALAIARVLAYLHEECLEWILHCDIKPQNILLDANFQPKLADFGLSKLQNRNNLNNSSVSMIRGTRGYMAPEWIFNLPITSKVDVYSYGIVVLEMITGKSPTTGFKIINGEKECDGRLVTWVREKRGSSISWLEEIVDPNIGLNYDKSKMEILTEVALECVVDERDSRPTMSRVVEMLQYHGND 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01263 795 CDD B_lectin 48 157 IPR001480 -
Trre14g01263 795 Pfam D-mannose binding lectin 82 170 IPR001480 -
Trre14g01263 795 Pfam PAN-like domain 340 401 IPR003609 -
Trre14g01263 795 PIRSF SRK 1 794 IPR024171 GO:0004674
Trre14g01263 795 SUPERFAMILY Protein kinase-like (PK-like) 494 791 IPR011009 -
Trre14g01263 795 CDD PAN_AP_plant 339 421 - -
Trre14g01263 795 SMART serkin_6 515 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01263 795 FunFam S-receptor-like serine/threonine-protein kinase 484 589 - -
Trre14g01263 795 Gene3D Hepatocyte Growth Factor 348 412 - -
Trre14g01263 795 ProSiteProfiles PAN/Apple domain profile. 340 416 IPR003609 -
Trre14g01263 795 Gene3D - 23 156 IPR036426 -
Trre14g01263 795 Gene3D Phosphorylase Kinase; domain 1 480 589 - -
Trre14g01263 795 ProSiteProfiles Bulb-type lectin domain profile. 22 154 IPR001480 -
Trre14g01263 795 PANTHER OS07G0415500 PROTEIN 9 790 - -
Trre14g01263 795 FunFam Putative receptor-like protein kinase 590 794 - -
Trre14g01263 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Trre14g01263 795 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Trre14g01263 795 CDD STKc_IRAK 521 790 - -
Trre14g01263 795 Pfam S-locus glycoprotein domain 243 323 IPR000858 GO:0048544
Trre14g01263 795 Pfam Protein kinase domain 518 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01263 795 Gene3D Transferase(Phosphotransferase) domain 1 590 795 - -
Trre14g01263 795 ProSiteProfiles Protein kinase domain profile. 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01263 795 SMART blect_4 28 157 IPR001480 -
Trre14g01263 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 212 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01263 Trre-Chr14 10881626 10884013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01263 505 789 Trihelix Transcription Factor Family AT5G38560 42.662 4.87e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre14g01263 Pkinase 6.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01263 - - mtr:11433991 1313.9