Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01262 ATGAATGACATCATTTCCCTTGTTCGAAGAGTAGCACCGTATGCTTTTGTTCCTATTCAACAGCATGTGGGTTATTTGATATCCTACGAAGATAATTTAATGAAGCTAACGGGTTTAGTTAAGACTCTTATAGCTTCAAAAGTAGCTATAAACCACAGGGTGGAAGCTGCAAGAAACAATGGAAACAGAATTGAAGATGTTGTTCAAAATTGGTTGGATGATGTGGATGAGGTCATTGAAAGGGCAAATAAGCTCTTGGAGGAAGATCGTCGCCGTCGAGAGGTTGGGTCGTCGGGCTGGTCTTTCCCTAATTTGATTTTACGACATCAGCTTGGCAAAAAAGCTACAGAGATAGCAGATGATGTTGCTGGAGTTCAGGGAAGAAGAAGTGATTTCAATGAAGTTGGTTACCTTCCACGATATGAAATTGGCTCTTCTTCTTGGTTACCTGGCGGTGAAAAGCTTGAGACAAGGGAAACATTTAAGGAAGACATCTTGGAGGCTCTAAGGGACCCTAAAGCAAGCAATATTGGAATCTATGGTTTGGGCGGTGTGGGTAAGACCTTTCTGGTGAAAGAAATCGCCGACATTGCCATACAACAAAAATTATTCGATGCAGTGGTTATCCCCCTTGTATCCAATGCTCCAGATATTGAGAAAATTCAATGGGTGATTGCAGATATGTTGGGTCTGAAATTTGAGGAAAAATCTACTGATGTTAGAGCCATGCGCCTAAAGGAGAGAATTAAAGCTGAGAAATCTGTCCTTATTATTCTCGATGATATTTGGCAGCCACTAGAACTGGAAAAAGTAGGAATTCCATCCAACAAAGAACACATTGGTTGCAAATTGTTGATGACCTCTAGAACTCAAGATGTGTTGCTGAAAATGCACGTCCAAAAGGATTTCACTTTCAGACTTGAACTTCTAAGTGAAAAAGAAACATGGAGCTTGTTTCAATCTATGGCAGAGGATGTGGTTAATGATATCAGTTTAAATAATTTAGCAACTCAAATTGCCAAAGAATGTAAAGGTTTGCCTCTTCTCATAGTGACAGTGGCAAGCGGATTGAAAAGTAAGGATATTTCTGTTTGGAAAGATGCATTGAGCCAATTACAAAGTGTTGGTCATGTGGAAATGGAAGAAATAGCTCGTTCTGTTTTAGAGTTGAGTTACCAGTGGTTGGCGAGTGACGAAATTCAGGCAGTCTTCTTGCTTTCTGCTGTACTAGGAGAATCTGGTGAAGATTACTTATTGAAAGTTGCAATGGGTTTGGAAATATTCATGAATATAGATACTGTGGATGGTGCAAGAAACAAATTTCATAGTATAATTGAATCATTGAAAGAATCTTGCCTGTTACTTGAAGGTAATAAGAGAAGTGGGTATATCCAAATGCATGACCTTGTTCGTGATGTTGCTATCTCCATAGCACGTAGGGATAAACATGTTTATATGTTGAAAACGAAGGATGAGTTGAAGAAATTTCTTACCAAGGATTGTCAAGAAAAGTGCTCACAGATTATCTTATCACAATGTCTTTTACACGAGCTTCCAAAAAAGTTAGATTGTCCTAATGTTAAACTTTTTGTATTTGTAAGTGCAAATCGTTTGTTAGAAATCCCAGATACTATTTTTGATGGGATGGGAAGCCTTAAAGTGTTAGATTTAACAAGTCTGAACTTGTCTTCATTACCCACTTCTTTTCATTCTCTAACAGACCTTCGGACATTGTGTTTGGACCAATGTGTTTTGGGAAATATTGATATAATAGCAGATTTGAAAAACTTAGAAATTCTTAGCTTTTGGAAATCTTCGATGACCAAATTGCCAATCAGATTAAGGGAAATGACTCAACTGAGAATGCTTGGTTTGAGCAATGCTGGAATAGAAGTCATCCCATCCAACATCTTTTCAAGTTTGACTAAACTAGAGGTGCTGTATCTGGGCAATATCTCCATCAATTGGGAAGATGAGAATTCAGCCATGCAAAAAGAAAATGCTAGCCTTTCTGAGCTTCAACGATTGCGCAACTTGACAGCTCTAGAATTACAAATTCACAATGCAAGGATTTTGCCAAGGGTCTTGAAATCAATGTTTGAAAAGCTGAAAAGGTATAAAATAGCCATCGGAGATGTATGGGAATGGTCTGACATTGAGCACACAACCTTAAATACACTGATGCTCAAACTTGATACCAACATACATTCGGAGTTGGGGATTAAAGCATTAATTAAAGGGGTTGAGAATTTGTACTTGGATGAAGTAGACGGCCTACAGAATGTGTTGTATGAAATGAACAGGGAAGGTTTTCCATTGTTGAGTCACCTCCACATCCAAAACAATGCAAAAATGAAGCACATAGTTTACTTTGATAACGCTGCAAAAATGAAGCACAATGTTTCCTTTCCGAAATTGGAAACTCTTTCAATTAACAATCTTGAAAATTTGGAGAAGATGTGTCATGGCCCACTTGCTATTAAATCTTTTGGTAAGCTCAGCGTTATCAAAGTAAAAAATTGTGCCAAATTGACATATCTTCTCTCCTTATCAATGGTTGAAAGACTTTCCAATCTTTCTGAGATCGAAGTTTGTCAATGCAATTCTATGAAGAACATAGTGCTCGGAGACTTGCCTGATGAAAAAGTAGAGTTTCGTTCTTTGCGTTCTTTAACTTTACAACACTTGGATAAACTTGATAATTTTTTCTCTTATGAGCTGATGGCATCTTCGATAACTTCTACTCGGCCATTTTTTAGTGCTCAGGTTGCATTCCCTGATTTGAAAACCCTTAAATTGAGCTCACTCAATTTGGATAAAATTTGGGACGACAATCAACATCCTATGTACAACTTGTCAGTCTTGATTGTGGAGAACTGTGGTGAGCTAAATAACTTATTTTCTTCTACTATGGTTCAAAGTTTTGTAAACCTCACATGGCTTGAAATTAGTAAATGTAATTTGATGAAGGAGATAATATCTACAGAGAGTAGAAACAATGTTACCATTGCATTGAATGAGGTTCCATTTCCCAAATTGGAGACAATTGTGCTGAAGGACATGGAAAATTTGAAGACAGTATGGCATTTCCAATTTGACAAAGTGAAAACATTGGAAGTCCAAAATTGTGAGAAAATTGTGGTTGTTATTCCTTCCTCAATGCAGAAGACTTATCATAATTTGGAGATGTTAGTGGTTAAGGATTGTGCTTTAGTGGAAAATATATTTGACTTGAGTTCTAGTGAAAATAGCAGCATAGAAAGTGAAATACAATTGAAATTAATCACTTTAGATCAATTGCCGAAGCTGATAAAGATATGGAGTAGGGATACTCAAGGAATTCTTAGTTTTCATAATCTACAAAATGTTTTTCTAAACCACTGTGATAGTATGGAGTATCTATTTCCATTTTCTGTAGCCACTACCTGCCCACATCTCGAAGTACTTGAAATAAAAAATTGTGGAAAGATGAAGGAAATTGTTTCAAAGAAGACAGATTCCACGGGTGCAAGTCCCACATTTGAGTATAATCAGCTACATACTATATTGCTTTGGGGCTTACATTCACTCAAGGGTATCTATGCAGGAAATCATATTCTAGCATGTCCCTCTTTGAGAAAACTAGATGTTTACGAATGTGCAAAGTTGAATTTATTCAAAACTGCAGCTCCGCCTGGAAGCAGCCACCAAATATGTGAAGATGAGAATCTCTCAGATTTATTCCAACCACTTTTCATTGTGGAAGAGCTGATTCCAAACTTGGAGTGGATGAGAATAGATGATAGGGATGCTATGATGATAATGCAAGCCCAAAATTTAGATTCTCTCTTCAACAAATTGACATTTCTTGGGGTGTCCAATTATAACAATGATGAGGCCACATTTCCTTACTGGTTTCTCCAAAATGCACTTTCTCTTGAAGAGCTAGTTGTTTCATGGAGTTCCTTCAAGATGATATTTGAAGATGAAACACTGGTGGGTATGAAAATTCACACACGCCTCAAAAAGTTGAGATTGTATCAATTACCTAAACTTCAGTATATATGTGAAGAAGGATCTCAAATCCACCCAGTTCTTGAGGTTCTTGAATACTTATATGTTGATTATTGTCCTAGTTTGACAAATTTGTTGTTGCCTTCCTCTGTCACCTTTAGTCACCTGACATATTTGGAGATAACAAAATGCAATAAACTGGTAAATTTGATTTCATCCTCAACTGCGCAAAGTATGGTAAAACTCACAGAATTGAGGTTAGAGGACTGTGACTCACTACAAGATATAATAATGGCAAAGGAAGATGTTGATATTGCATTTGTTAGTCTTCAAATATTGATACTCAAAGGTTTGCCAAGCCTCAACAACTTTTGCTCAAGTAAGTGTTGCTTGAAGTTTCCATTGTTGGAGAAAGTAGTTGTGAGCAACTGTCCTCTCATGGATATTTTCTCTGAGGGAAACACAAGTACACCAAGTCTTCGAAAAGTCAAAATTGAAGAAAATAGTGAAGAATGGACTTGGAATGGGAACCTAAATGATACCATAAAAAAAATGTTTGAAGATAAGGTTGCATTCCGTGGTTTGAAAAGCCTTAAATTGAGCCCACTCAATTTACATAAAATTTGGAACGACAGTCAACATTCTATGTACAACTTGACAGTCTTGATTGTGGAGAACTGTGGTGAGCTAAAGTACTTATTTTCTTCTACCATGGTTCAAAGGTTTGTAAACCTCACACGACTTGAAATTAGTAACTGTAATTTGATGAATGAGATAATAGCTACAGAAAGTAGAAACGATGTTACCATTGCATTGAATGAGGTTCCATTTCCCAAATTGGAGACAATTGTGCTGAAGGACATGGAAAATTTGAAGACGGTATGGCATTACCAGTTTGACACAGTGAAGACGTTGGAAGTCCAAAATTGTGAGAAAATTGTGGTTGTTTTTCCTTCCTCAATGGATAAGACTTATCATAATCTGGAGATGTTAGTGGTTAAGGATTGTGCTTTAGTGGAAAATATATTTGAATTGAGTTCTAGTGAAATTAGTAGCATAGAAAGTGAAACACAATTGAAAGTAATCACTTTAGATCAATTGCCGAAGCTGATAAAGATATGGAGTAGGGATACTCAAGGAATTCTTAGTTTTCATAATCTACATAATGTTTTTCTAAACCAGTGTGATAGTATGGAGTATCTATTTCCATTTTCTGTAGCCACTGCCTGCCCACATCTCGAAGTACTTGAAATAAAATATTGTGGAAAGATGAAGGAAATTGTTTCAAAGAAGACAGATTCCACGGGTGCAAGTCCCACATTTGTGTTTAATCAGCTACATACTATATTGCTTTGGGGCTTACATTCACTCAAGGGTATCTATGCAGGAAATCATATTCTAGCATGTCCCTCTTTGAGAAAACTAGATGTTTCCGGATGTCCAAAGTTGAATTTATTCAAAACTGCAGCTCCGCCTGGAAGCAGCCTCCAAATATGTGAAGATGAGAATCTCTCAGATTTTTTATTCCAACCACTTTTCATTGTGGAAGAGGTGATTCCAAACTTGGAGTGGATGAGAATAGATGATTGGGATGCTATGATGATAATGCAAGCCCAAAATTTAGATTCTCTCTTCAACAAATTGACATTTCTTGGGGTGTCCAATTATAACAATGATGAGGCCACATTTCCTTACTGGTTTCTCCAAAATGCACCTTCTCTTGAAACGCTAGTTGTTTCATGGAGTTCCTTCAAGAAGATATTTGAAGATGAAACACTGGTGGGTATGAAAATTCACACACGCCTCAAAAAGTTGTCATTGTATCAATTACCTAAACTTCAGCATATATGTGAAGAAGGATCTCAAATTCACCCAGTTCTTGAGGTTCTTGAACAATTATTTATTAAATATTGTCCTAGTTTGACAAATTTGTTGTTGCCTTCCTCTGTCACCTTTAGTCACCTAACATATTTGGAGATAACAAAATGCAATAAACTGGTAAATTTAATTACATCCTCGACTGCGCAAAGTTTGGTAAAACTCACAGAATTGAAGGTAGAGGACTGTGACTCACTACAAGAAATAATAATGGGAAAGGAAAATGTTGATATTGCATTTGTTAGTCTTGAAATATTGATACTCAAAGATTTGCCTAGCCTCAACAATTTTTGCTCAAGTAAGTGTTGCTTGAAGTTTCCATTGTTGGAGCTTGTAGTTGTGAGCAAATGTAATAGCATGGAGATGTTCTCTAAGGGAAACACAAGCACACCAAGTCTTCAAAAAGTCAGTATTGAAGAAAATAGCGAAGAATGGTATTGGAAGGCGAACCTAAATGATACAATAAAAGAAATGTTTGAAGATAAGGCTGCATTCCCTGATTTGGTAACCCTTAAACTGATCAGCATACTCAATTTGAATAAAATTTGGTATGAAAATCAACATTCTATGTACAGCTTTGACAATCTTGATTGTAGAGAACTATGGTGGGCTAAAGTACTTATTTTCTTCTCCTAG 6507 0.3665 MNDIISLVRRVAPYAFVPIQQHVGYLISYEDNLMKLTGLVKTLIASKVAINHRVEAARNNGNRIEDVVQNWLDDVDEVIERANKLLEEDRRRREVGSSGWSFPNLILRHQLGKKATEIADDVAGVQGRRSDFNEVGYLPRYEIGSSSWLPGGEKLETRETFKEDILEALRDPKASNIGIYGLGGVGKTFLVKEIADIAIQQKLFDAVVIPLVSNAPDIEKIQWVIADMLGLKFEEKSTDVRAMRLKERIKAEKSVLIILDDIWQPLELEKVGIPSNKEHIGCKLLMTSRTQDVLLKMHVQKDFTFRLELLSEKETWSLFQSMAEDVVNDISLNNLATQIAKECKGLPLLIVTVASGLKSKDISVWKDALSQLQSVGHVEMEEIARSVLELSYQWLASDEIQAVFLLSAVLGESGEDYLLKVAMGLEIFMNIDTVDGARNKFHSIIESLKESCLLLEGNKRSGYIQMHDLVRDVAISIARRDKHVYMLKTKDELKKFLTKDCQEKCSQIILSQCLLHELPKKLDCPNVKLFVFVSANRLLEIPDTIFDGMGSLKVLDLTSLNLSSLPTSFHSLTDLRTLCLDQCVLGNIDIIADLKNLEILSFWKSSMTKLPIRLREMTQLRMLGLSNAGIEVIPSNIFSSLTKLEVLYLGNISINWEDENSAMQKENASLSELQRLRNLTALELQIHNARILPRVLKSMFEKLKRYKIAIGDVWEWSDIEHTTLNTLMLKLDTNIHSELGIKALIKGVENLYLDEVDGLQNVLYEMNREGFPLLSHLHIQNNAKMKHIVYFDNAAKMKHNVSFPKLETLSINNLENLEKMCHGPLAIKSFGKLSVIKVKNCAKLTYLLSLSMVERLSNLSEIEVCQCNSMKNIVLGDLPDEKVEFRSLRSLTLQHLDKLDNFFSYELMASSITSTRPFFSAQVAFPDLKTLKLSSLNLDKIWDDNQHPMYNLSVLIVENCGELNNLFSSTMVQSFVNLTWLEISKCNLMKEIISTESRNNVTIALNEVPFPKLETIVLKDMENLKTVWHFQFDKVKTLEVQNCEKIVVVIPSSMQKTYHNLEMLVVKDCALVENIFDLSSSENSSIESEIQLKLITLDQLPKLIKIWSRDTQGILSFHNLQNVFLNHCDSMEYLFPFSVATTCPHLEVLEIKNCGKMKEIVSKKTDSTGASPTFEYNQLHTILLWGLHSLKGIYAGNHILACPSLRKLDVYECAKLNLFKTAAPPGSSHQICEDENLSDLFQPLFIVEELIPNLEWMRIDDRDAMMIMQAQNLDSLFNKLTFLGVSNYNNDEATFPYWFLQNALSLEELVVSWSSFKMIFEDETLVGMKIHTRLKKLRLYQLPKLQYICEEGSQIHPVLEVLEYLYVDYCPSLTNLLLPSSVTFSHLTYLEITKCNKLVNLISSSTAQSMVKLTELRLEDCDSLQDIIMAKEDVDIAFVSLQILILKGLPSLNNFCSSKCCLKFPLLEKVVVSNCPLMDIFSEGNTSTPSLRKVKIEENSEEWTWNGNLNDTIKKMFEDKVAFRGLKSLKLSPLNLHKIWNDSQHSMYNLTVLIVENCGELKYLFSSTMVQRFVNLTRLEISNCNLMNEIIATESRNDVTIALNEVPFPKLETIVLKDMENLKTVWHYQFDTVKTLEVQNCEKIVVVFPSSMDKTYHNLEMLVVKDCALVENIFELSSSEISSIESETQLKVITLDQLPKLIKIWSRDTQGILSFHNLHNVFLNQCDSMEYLFPFSVATACPHLEVLEIKYCGKMKEIVSKKTDSTGASPTFVFNQLHTILLWGLHSLKGIYAGNHILACPSLRKLDVSGCPKLNLFKTAAPPGSSLQICEDENLSDFLFQPLFIVEEVIPNLEWMRIDDWDAMMIMQAQNLDSLFNKLTFLGVSNYNNDEATFPYWFLQNAPSLETLVVSWSSFKKIFEDETLVGMKIHTRLKKLSLYQLPKLQHICEEGSQIHPVLEVLEQLFIKYCPSLTNLLLPSSVTFSHLTYLEITKCNKLVNLITSSTAQSLVKLTELKVEDCDSLQEIIMGKENVDIAFVSLEILILKDLPSLNNFCSSKCCLKFPLLELVVVSKCNSMEMFSKGNTSTPSLQKVSIEENSEEWYWKANLNDTIKEMFEDKAAFPDLVTLKLISILNLNKIWYENQHSMYSFDNLDCRELWWAKVLIFFS 2168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01262 2168 SUPERFAMILY L domain-like 893 1220 - -
Trre14g01262 2168 Gene3D Ribonuclease Inhibitor 1486 1651 IPR032675 -
Trre14g01262 2168 Gene3D Ribonuclease Inhibitor 1868 2115 IPR032675 -
Trre14g01262 2168 Gene3D Ribonuclease Inhibitor 1652 1828 IPR032675 -
Trre14g01262 2168 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1657 1817 - -
Trre14g01262 2168 Pfam Leucine rich repeat 533 583 IPR001611 GO:0005515
Trre14g01262 2168 Gene3D - 309 396 IPR042197 -
Trre14g01262 2168 PRINTS Disease resistance protein signature 343 357 - -
Trre14g01262 2168 PRINTS Disease resistance protein signature 547 563 - -
Trre14g01262 2168 PRINTS Disease resistance protein signature 249 263 - -
Trre14g01262 2168 PRINTS Disease resistance protein signature 176 191 - -
Trre14g01262 2168 SMART AAA_5 173 309 IPR003593 GO:0016887
Trre14g01262 2168 Pfam NB-ARC domain 159 392 IPR002182 GO:0043531
Trre14g01262 2168 Gene3D Ribonuclease Inhibitor 1090 1479 IPR032675 -
Trre14g01262 2168 Gene3D Ribonuclease Inhibitor 497 1071 IPR032675 -
Trre14g01262 2168 SUPERFAMILY RNI-like 1105 1428 - -
Trre14g01262 2168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 405 IPR027417 -
Trre14g01262 2168 SUPERFAMILY RNI-like 1703 2027 - -
Trre14g01262 2168 Gene3D - 150 303 IPR027417 -
Trre14g01262 2168 SUPERFAMILY L domain-like 465 896 - -
Trre14g01262 2168 Coils Coil 68 92 - -
Trre14g01262 2168 SUPERFAMILY RNI-like 1357 1591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01262 Trre-Chr14 10864194 10876576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01262 177 481 WRKY Transcription Factor Family AT5G45050 22.364 9.96e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01262 - - tpra:123888073 3160.55