Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01251 ATGGCTTTCACAATTTCACATATAATTCTTCTAGTCATCTTTCTATTTCCTTTCCAATATTGTTCATGTTATTTAACATCATTGAAAAAGGGTTCATTTCTATTAGTAGAGAAACATGAAAAAGATGTAATTGTCTCTTCAAATGGAATATTCTCTGCTGGGTTCTATCAAATTGGTGAAAATGCATTTTCATTTGCAATATGGTTTACAGAGCTGAAGAATCAAAGTCACAATCCAGCCAATATTGTATGGATGGCAAACCGTGAACAACCTGTGAATGGTAAGAAATCAAAGCTTCTCCTCTTAAACACAGGTAACATTCTCTTGCTTGATGCGGGTCAACACATCACTTGGTCTTCAAACACAGCTTCAAATGCACCATTAGAGTTGTATCTCAAAGAAGATGGTAATCTTGTGTTACGTGAGCTTCAAGGAACTATCATCTTGTGGCAAAGCTATGATTTTCCAACAAATACTCTGCTTCCCAATCAATCTCTTGCTAGACACACTAATCTTGTTTCATCAAGAAGCCAGAGTAATCATTCTTCTGGCTTTTATAAGTTGTTCTTTGATGATAACAATATTCTTCGTCTCGATTATGATGGTCTTGATGTTTCCAGTACATATTGGCCTCCATCTTGGATATTACCCTGGCAAGCTGGAAGGTCCAATTACAATAGTACTAGAATTGCTGTGTTGGATTATCTTGGAAAGTTTATTTCATCTGATAATTATATTTTTTCCACATATGATTATGGAATTGATATGCAAAGAAGACTGACCTTGGATTTTGATGGTAATATTCGAGTTTACAGTCGAACAAACATGTCAGATAATTGGTATGTTTCATGGCAAGTCATAATTGATACTTGCATCATTCATGGAATTTGTGGTCCAAATAGCACTTGTAGCTATGATCCTAAAAATGGTAAGAAATGCTCTTGTTTGCCTGGATACAAAATGAAGAACCATAGTGATTGGTCTTATGGTTGTGAACCTATGTTTGATTTTACTTGCAACAAAAAGGGTAGTAACGTCTTCCAATGCTATACAAAGCTACAATTGTTGAATGGGAGACATTCACCGAGTTTTCAAGGAATAACTTACATGAGAATCCCAAAAGTTGGTGGTTTAGAATTTGTTTTATTTTTTGTGATTTTTGTTTTTTTAAATAAGACTAACAAAAAGTCTAATGCAAATGAACATAACAACTATCATGCATTGTTGGGATTTAGAAGATATAGTTACTCCGAGTTGAAGTTAGCAACAAAGAATTTCAGTAATGAGATCGGAAGAGGTGGAGGAGGGATTGTATATAGAGGTACATTGCCAGATCAAAGACATGCAGCAATAAAGAGATTGAATGAAGCTCAACAAGGAGAAGGAGAGTTTCTTGCTGAAGTAAGCATCATTGGAAGTCTCAATCACATGAACTTGATTGAAATGTGGGGATATTGTGTTGAAGGTAAGCATAGACTTTTGGTATATGAGTATATGGAAAATGGTTCTTTAGCTGAAACTCTTTCATCTAAATCTATTATCCTTGATTGGAGTAAAAGGTATGATATTGCTTTAGGAATTTCTAGAGTTTTAGCTTACCTACATGAAGAGTGTTTGGAATGGATTTTGCATTGTGATATAAAGCCACAAAATATACTTCTTGATTCTAACTTTCAACCCAAGTTAGCAGATTTTGGATTGTCTAAGCTGAAAAATAGAAACAATATCAATAATAATTCAGAATTCTCAATGATTCGAGGAACAAGAGGATATATGGCCCCTGAATGGATTTTCAATTTACCAATAACATCTAAAGTGGATGTATATAGCTACGGGGTTGTTTTGTTGGAGATGGTAACCGGAAAGAGTCCAACAATGATGAATGTAGAAGGAGATGATGGAGAAGTGGCTTATAATGGAAGGTTGATAACTTGGGTAAGAGAGAAAAAGAGGAGTAGTAGTACATGCTGGGTGGAAGAAATTATGGATCCTTCAATGGTGAATAATTGTGATTTGATTAAGATGGAAGTTTTGGCTAGAGTTGCTTTGGATTGTGTTGAGGAAGATAGAGATATTAGACCTACTATGAGTCAAGTGGTTGAGATGCTTCAAAGTCGTGATAGAGATGTTGAGTAA 2136 0.3493 MAFTISHIILLVIFLFPFQYCSCYLTSLKKGSFLLVEKHEKDVIVSSNGIFSAGFYQIGENAFSFAIWFTELKNQSHNPANIVWMANREQPVNGKKSKLLLLNTGNILLLDAGQHITWSSNTASNAPLELYLKEDGNLVLRELQGTIILWQSYDFPTNTLLPNQSLARHTNLVSSRSQSNHSSGFYKLFFDDNNILRLDYDGLDVSSTYWPPSWILPWQAGRSNYNSTRIAVLDYLGKFISSDNYIFSTYDYGIDMQRRLTLDFDGNIRVYSRTNMSDNWYVSWQVIIDTCIIHGICGPNSTCSYDPKNGKKCSCLPGYKMKNHSDWSYGCEPMFDFTCNKKGSNVFQCYTKLQLLNGRHSPSFQGITYMRIPKVGGLEFVLFFVIFVFLNKTNKKSNANEHNNYHALLGFRRYSYSELKLATKNFSNEIGRGGGGIVYRGTLPDQRHAAIKRLNEAQQGEGEFLAEVSIIGSLNHMNLIEMWGYCVEGKHRLLVYEYMENGSLAETLSSKSIILDWSKRYDIALGISRVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLKNRNNINNNSEFSMIRGTRGYMAPEWIFNLPITSKVDVYSYGVVLLEMVTGKSPTMMNVEGDDGEVAYNGRLITWVREKKRSSSTCWVEEIMDPSMVNNCDLIKMEVLARVALDCVEEDRDIRPTMSQVVEMLQSRDRDVE 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01251 711 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Trre14g01251 711 CDD B_lectin 44 156 IPR001480 -
Trre14g01251 711 Gene3D - 27 155 IPR036426 -
Trre14g01251 711 Pfam D-mannose binding lectin 82 171 IPR001480 -
Trre14g01251 711 Pfam S-locus glycoprotein domain 235 322 IPR000858 GO:0048544
Trre14g01251 711 CDD STKc_IRAK 430 704 - -
Trre14g01251 711 FunFam Serine/threonine-protein kinase 499 711 - -
Trre14g01251 711 Gene3D Phosphorylase Kinase; domain 1 388 498 - -
Trre14g01251 711 SUPERFAMILY Protein kinase-like (PK-like) 401 705 IPR011009 -
Trre14g01251 711 Gene3D Transferase(Phosphotransferase) domain 1 499 710 - -
Trre14g01251 711 PANTHER OS07G0415500 PROTEIN 338 706 - -
Trre14g01251 711 PIRSF SRK 359 710 IPR024171 GO:0004674
Trre14g01251 711 PIRSF SRK 1 368 IPR024171 GO:0004674
Trre14g01251 711 Pfam Protein kinase domain 427 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01251 711 SMART serkin_6 424 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01251 711 SMART blect_4 35 156 IPR001480 -
Trre14g01251 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Trre14g01251 711 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
Trre14g01251 711 ProSiteProfiles Bulb-type lectin domain profile. 19 153 IPR001480 -
Trre14g01251 711 Gene3D - 156 283 IPR036426 -
Trre14g01251 711 CDD EGF_CA 288 323 - -
Trre14g01251 711 FunFam S-receptor-like serine/threonine-protein kinase 392 498 - -
Trre14g01251 711 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 173 IPR036426 -
Trre14g01251 711 ProSiteProfiles Protein kinase domain profile. 424 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01251 711 Coils Coil 700 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01251 Trre-Chr14 10745381 10748841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01251 414 710 Receptor kinase-like Gene Family AT1G56120 44.079 1.55e-62 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre14g01251 Pkinase 3.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01251 - - gmx:100784287 917.916