Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01229 ATGAAGGAAGGTGGAGCAACAACAGCAGCACCTTCATCCTCCTCATCTTCATGGAGTAGGCTCCCTCCTATGCCTCCACACAGATTTGAAGATAGCGATGAAGATCTATTCGAAGTTCCAGATGTGGAAGGTACACAAAGTCAAAGTGTCCATTCAGAAGGAACAAATCAAAATAGTAATCATAATCAAAACAACGCAACAGATCCTCAACTTCAACCTGGCTTTCCTGGAAAGCGCCGCCGTGGAAGAAACCCCGCAGATAAAGAATATAGACGACTCAAAAGGTTGCTAAGGAACAGGGTCTCTGCCCAACAAGCTCGTGAAAGGAAAAAAGTTTATGTGAATGACTTAGAATCAAGAGCTAAAGAGATGGAAGATAAGAACTCCAATTTAGAAGAGCGCATCTCAACTTTGATCAATGAAAACACCATGCTCCGAAAGGTTCTTATGAACACTAGACCCAAAGTTGATGAGAGCAATGAACCTTAG 489 0.4254 MKEGGATTAAPSSSSSSWSRLPPMPPHRFEDSDEDLFEVPDVEGTQSQSVHSEGTNQNSNHNQNNATDPQLQPGFPGKRRRGRNPADKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKEMEDKNSNLEERISTLINENTMLRKVLMNTRPKVDESNEP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01229 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Trre14g01229 162 MobiDBLite consensus disorder prediction 42 71 - -
Trre14g01229 162 Coils Coil 107 148 - -
Trre14g01229 162 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 9 159 IPR044280 GO:0000981|GO:0045944
Trre14g01229 162 SUPERFAMILY Leucine zipper domain 90 150 IPR046347 GO:0003700|GO:0006355
Trre14g01229 162 SMART brlzneu 87 151 IPR004827 GO:0003700|GO:0006355
Trre14g01229 162 CDD bZIP_HY5-like 101 142 - -
Trre14g01229 162 FunFam Transcription factor HY5 110 151 - -
Trre14g01229 162 Pfam bZIP transcription factor 88 147 IPR004827 GO:0003700|GO:0006355
Trre14g01229 162 MobiDBLite consensus disorder prediction 7 21 - -
Trre14g01229 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 152 IPR004827 GO:0003700|GO:0006355
Trre14g01229 162 Gene3D Single helix bin 110 151 - -
Trre14g01229 162 MobiDBLite consensus disorder prediction 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01229 Trre-Chr14 10561898 10564438 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01229 64 158 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 72.917 9.77e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre14g01229 bZIP_1 1.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01229 K16241 - gmx:100783826 221.09