Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01227 ATGGATTTAAGAGATTTATGGATTGTCTACTTTATGTTTTGTAGCTTCTTGGTTGTTGCTTTTTGTGGAAAAGATGGTTTCTTGAGTCTATCATGTGGAGGAAAAACCAGCTTCAATGATTCATCTAACATTTCATGGTTCCAAGACACTGCTTACATAACAACTGGAAAGACAACCACAATCAATTACAATGATGGTTCCTTGTCAACAAATGTCTCGGCTCGGTTCTTCCCTTATTCCAAACGTCGTGCATGCTATCGGATACCGGTGAACAATGCAACTAGTTTGATTCTTGTGAGAGCCAAATTTGTATACAAAAACTATGATGGACATAGAAAACCACCAACTTTCTATGTTTCTCTTGGAACAGCTATTGCTGCTAAGATAAATCTAGCTAAAAATGATCCATTGATAGAAGAGTTTCTTTGGGAAGTTAACAAGGATACACTTGTGTTTTGTTTGAATTCAATTCCAAATGGTGGTTCTCCTATAATTTCTTTACTTGAAATTAGACCTCTTCCTAAAGGATCCTACATAAAGGGAAAAGAAGATTTCCCAAATAAGTTACTTAGGATGAGTTATAGAATTGATTGTGGACACATCAATGAGTCTATAAGGTACCCTATGGATCCATATGATAGAATATGGAATGGTGATAGAAGTTTCATACCTTTTCATGCTACAACTGGGTTTAAGATTCAGAGTCGCTTCAATCAATCCAATATTGTGGAGAAACCACCGGTTTCTGTTCTTCAAACTGGAAGAGTCTTGGCGAGACGAAACATGCTAGCATATAACCTCCCTCTTGAGGGATTAGGGGACTACTACATTATCCTCTATTTTGCTGGAATTCTTCCTGTTTTCCCCTCATTTGATGTATTCGTAAATGGAGATCTTATCAATGCATTTGAAGTATATAATATGGTTGATATTCCGCCAGAAGCCTCCTCAACCACAGTTTCAGCAATGCAGGTTATTCAGCAATCCACCGGATTGGATCTTGGATGGCAAGATGATCCATGCTCCCCTTTCCCATGGGATCACATACTTTGTGAAGGAAACTTAGTTACATCATTGGCTCTCTCAGACAGAAATTTGAGATCAATTAGTCCTACATTTGGTGACTTGTTGAACCTTAAAACATTGGATTTGCACAACTCATCACTTGCTGGTGAAATCCAGAATTTGGGTAGCTTGCAAAGTCTTGCAAAACTGAACCTTAGTTTCAATCAGCTGACATCCTTTGGTGAAGAGCTGGAGAACTTGATTAACCTTCAAATTTTAGACTTGGAAAATAATAATCTCCAAGGAGTAGTGCCTGATAGCTTGGGAGAGATAGAAAACCTCCATTTACTGAATCTAGAAAACAATAATCTACAGGGTCCACTTCCACAGTCTTTGAACAAAGACACTATAGAGATCAGAACATCTGGAAACTTGTGCCTTACTTTTTCTACAACCGGATGTAACGACGCATCATCCAATCCTCCAATTGTGGCACCACAACTGATTACATTTCCCAAAAGGAAGCACCATGGACAAAATCATCTAGCAGTAATACTAGGCACAGTTGGAGGATCTACGCTTGCCATTTTCCTGATATGTCTATCAGTATTTATATACAATGCTAAAAGAAGATATCAAGCCTCACACAGAACTAGGGAAGAAACTGATATGAGGAACTGGGGTGCAGAAAAGGTTTTTACCTACAAAGAAATCAAAGTAGCTACTAGTAATTTTAAGGATATCATAGGAAGAGGAGGTTTTGGATCTGTTTACCTTGGAAAGCTTCCAAATGGAAAATCAGTTGCTGTCAAAGTTCGGTTCGATAAATCCCAACTTGGGGTTGATTCTTTCATCAATGAGATTCATCTCTTGTCGAAAATCCGCCATCAAAATCTTGTGACTTTGGAAGGATTTTGTCATGAATCAAAGCATCAGATATTGGTTTATGAATACTTACCTGGTGGATCCCTGGCTGATCACCTCTATGGTACAAACAGTCTTAAAGCTCCCTTAAGCTGGATTCGAAGGTTGAAAATTGCTGTCGATGCAGCAAAAGGATTGGATTATTTGCATAATGGAAGTGAACCGAGAATCATACACCGCGATGTCAAGTGTAGTAACATTCTCTTGGACATGGATTTGAATGCCAAGGTTTGTGACTTTGGCCTTTCTAAGCAGGTAACCAAAGCAGATGCAACTCATGTCACAACTGTTGTCAAGGGAACTGCTGGTTATCTAGATCCAGAGTATTACTCTACCCAACAACTTACTGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGATTCACTCTGGGACTCCTGATTCATTCAATTTGGTTTTATGGGCCAAACCCTATTTACAGGCAGGTGCATTTGAAGTTGTGGATGAAAGCATACAAGGAACTTTTGATCTAGAGAGCATGAAGAAGGCGGCGTTCATTGCTGTGAAGTCGGTGGAAAGAGATGCATCACAGAGGCCACCTATTTCTGAAGTATTATCAGAGCTAAAGGAAGCTTATGGAATTCAGCTCAGGTTTCTCGAGTCATGTCAAAATAATAACTGA 2604 0.3898 MDLRDLWIVYFMFCSFLVVAFCGKDGFLSLSCGGKTSFNDSSNISWFQDTAYITTGKTTTINYNDGSLSTNVSARFFPYSKRRACYRIPVNNATSLILVRAKFVYKNYDGHRKPPTFYVSLGTAIAAKINLAKNDPLIEEFLWEVNKDTLVFCLNSIPNGGSPIISLLEIRPLPKGSYIKGKEDFPNKLLRMSYRIDCGHINESIRYPMDPYDRIWNGDRSFIPFHATTGFKIQSRFNQSNIVEKPPVSVLQTGRVLARRNMLAYNLPLEGLGDYYIILYFAGILPVFPSFDVFVNGDLINAFEVYNMVDIPPEASSTTVSAMQVIQQSTGLDLGWQDDPCSPFPWDHILCEGNLVTSLALSDRNLRSISPTFGDLLNLKTLDLHNSSLAGEIQNLGSLQSLAKLNLSFNQLTSFGEELENLINLQILDLENNNLQGVVPDSLGEIENLHLLNLENNNLQGPLPQSLNKDTIEIRTSGNLCLTFSTTGCNDASSNPPIVAPQLITFPKRKHHGQNHLAVILGTVGGSTLAIFLICLSVFIYNAKRRYQASHRTREETDMRNWGAEKVFTYKEIKVATSNFKDIIGRGGFGSVYLGKLPNGKSVAVKVRFDKSQLGVDSFINEIHLLSKIRHQNLVTLEGFCHESKHQILVYEYLPGGSLADHLYGTNSLKAPLSWIRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMDLNAKVCDFGLSKQVTKADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLIHSGTPDSFNLVLWAKPYLQAGAFEVVDESIQGTFDLESMKKAAFIAVKSVERDASQRPPISEVLSELKEAYGIQLRFLESCQNNN 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01227 867 Gene3D Phosphorylase Kinase; domain 1 541 653 - -
Trre14g01227 867 Gene3D - 190 328 - -
Trre14g01227 867 FunFam serine/threonine-protein kinase PBS1-like 546 653 - -
Trre14g01227 867 Pfam Protein kinase domain 581 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01227 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Trre14g01227 867 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Trre14g01227 867 Pfam Malectin-like domain 30 311 IPR024788 -
Trre14g01227 867 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 654 859 - -
Trre14g01227 867 Gene3D Ribonuclease Inhibitor 329 475 IPR032675 -
Trre14g01227 867 Gene3D Transferase(Phosphotransferase) domain 1 654 859 - -
Trre14g01227 867 ProSiteProfiles Leucine-rich repeat profile. 401 423 IPR001611 GO:0005515
Trre14g01227 867 SMART LRR_typ_2 422 445 IPR003591 -
Trre14g01227 867 SMART LRR_typ_2 399 421 IPR003591 -
Trre14g01227 867 ProSiteProfiles Protein kinase domain profile. 578 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01227 867 SUPERFAMILY Protein kinase-like (PK-like) 557 849 IPR011009 -
Trre14g01227 867 Pfam Leucine rich repeat 401 459 IPR001611 GO:0005515
Trre14g01227 867 SUPERFAMILY L domain-like 321 469 - -
Trre14g01227 867 PANTHER OS07G0107800 PROTEIN-RELATED 418 853 - -
Trre14g01227 867 CDD STKc_IRAK 584 851 - -
Trre14g01227 867 SMART serkin_6 578 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01227 Trre-Chr14 10551095 10556817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01227 8 867 Receptor kinase-like Gene Family AT5G48740 59.197 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trre14g01227 Malectin_like 7.6e-48 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01227 - - aprc:113850446 1357.81