Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01197 ATGGGTTTCGGCAGTTGTTCAAATCTATTTTCTGTTTTGTTCATTTTATGTTGCTATTCGTTACACTTTAGTATTGCCATAGATACCATCACATCATCCCAATTTATCAAGGACCCTGAGACTCTAATCTCCAAAGATGGTAACTTCACCTTTGGATTCTTTAGCCCTAAAAATTCTACTAGTCGTTACGTTGGAATTTGGTGGAAGTCTCAATCTACAATCATATGGGTGGCAAACAGAAACCAACCGATGAACGATTCCAATGGGACTGCCACGATATATGAAGATGGAAATCTTGTGGTATTAAATGGACAGAAACGAGTCATTTGGTCATCAAATGTTTCCAACATAGCATCCAATACAAGTTGTCAGTTTTCAGACTTTGGTAACGTTGTCCTTTTGGAGAGCACAACTGGAAACATCTTATGGCAGAGTATTGAGCATCCTTCAGATACATTTCTTCCAGGCATAAAACTTTACACCAACAAAAGAACTGGCAAGAGAGTAAAACTCACATCATGGAAAAGCTCTTCTGACCCCTCTGTTGGCAACTTCTCTTTTAGTACTGTTGAACGCCTAAATATACTTGAAGTGTTCATTTGGAATGAAACTCGACCATGCTGGCGCAGTGGTCCTTGGAATGGTGGGGTCTTTACTGGGATACAAACAATGAAACTCGCATATCTTAATACTTTTCAAGTTGGAGATGATGGAGAAGGAAATATTGGTATATCTTATACAATATCAAATGAGGAGGAATTGGGGATCTATCACCTGAACTCACAAGGGAAATTAGAAGAAACAGGGTGGGATGATGAGAAGAAAGAAGTGCAAGTTTCATGGACTAGCCGAATGTCGGAGTGTGATGTTTATGGAATTTGTGGGGTATTTGCTAGATGTAATTCATTGAGCTCACCGATATGCAGCTGTTTGAGAGGATTTGAACCTATGAGCATACAGGAATGGACTCGTCACAACTGGACTAGTGGGTGTGTTAGGAGGACACCTTTGCAATTGCAGTGTAAAAGGGTTAACAACAAAACCACTAGTACAAAGGAAGATGGGTTTTTGAAATTGAAGATGGTTAAAGTTCCTGATTTTGCAGAAGGAACAGCTGTGACACCAGACATATGCAGAAGCTTATGCTTAGAGAATTGCTCTTGTGTTGCATATTCACATGATACTAGGATTGGCTGCATGTCTTGGACAAAGGATTTACTTGACATACAAGAACTCCAAAGTGGAGGACTTGATCTATATTTTCGTGTAGCCCACACAGAGCTTGAAAGAGGGAGAAATAAAACAATCATCATTGCAATTATGGTAACAATAGGAACTCTCATTATTGTCATCTGCACATATATCATGTGGAGAAAGACTTCAAACGACTTCACCACCTTCACCTGTCCTTACTACTTCTTCGACCACCCCTACCATGGATCTTATCTTGATCTCGGGCAGGGTGGTTTTGGTCCAGTATACATGGGGAAACTGCAAGATGGTCAAGAAATAGCAGTGAAAAGACTTTCTAGAGCATCTGGTCAAGGTCTAGAAGAATTCATGAATGAAGTAGTTGTTCTTTGTAAGCTACAACACCGCAATCTTGTGAAACTTCTTGGCTGCTGTATTGAAGGTGATGAAAAGATGTTGGTGTATGAGTATATGTCAAACAAAAGTTTGGATGTATTTATCTTTGATGAGGAGCTGAATCCCAAAATATCAGATTTTGGTATGGCTAGAATCTTTGGAGGGAGAGAAGATCAAGCCAACACTACTAGAGTTGTCGGAACTTATGGCTATATGTCTCCTGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGATACTTGAGATCGTTAGTGGGAGAAGAAACTCGAGCTTTTACGACAATGAGCACGCTCTAAGCCTTTTAGGATTTGTTTGGATAGAATGGCGGGAAAGAAATATTTTATCTTTAATAAATGCAGAAATTTATGATCATAGTGATCATAATTATATTTCAAGGTGCATACATATAGGGCTCTTGTGTGTACAAGAACTTGCTGTAGATAGGCCCACTATGGCTGCAGTAATTTCTATGCTTATCAGTGAGGCTGTATTTCTTCCTCCGCCTAGTCAGCCTGCTTTCATCTTGAGGCAGAATCTGTTGAACTCGAAGTCACCTGTTGAAGATCAAAATGTTCTATCCATCAATATGGTCAGTATTACAGACATATCTGGCAGATAG 2253 0.3937 MGFGSCSNLFSVLFILCCYSLHFSIAIDTITSSQFIKDPETLISKDGNFTFGFFSPKNSTSRYVGIWWKSQSTIIWVANRNQPMNDSNGTATIYEDGNLVVLNGQKRVIWSSNVSNIASNTSCQFSDFGNVVLLESTTGNILWQSIEHPSDTFLPGIKLYTNKRTGKRVKLTSWKSSSDPSVGNFSFSTVERLNILEVFIWNETRPCWRSGPWNGGVFTGIQTMKLAYLNTFQVGDDGEGNIGISYTISNEEELGIYHLNSQGKLEETGWDDEKKEVQVSWTSRMSECDVYGICGVFARCNSLSSPICSCLRGFEPMSIQEWTRHNWTSGCVRRTPLQLQCKRVNNKTTSTKEDGFLKLKMVKVPDFAEGTAVTPDICRSLCLENCSCVAYSHDTRIGCMSWTKDLLDIQELQSGGLDLYFRVAHTELERGRNKTIIIAIMVTIGTLIIVICTYIMWRKTSNDFTTFTCPYYFFDHPYHGSYLDLGQGGFGPVYMGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVLCKLQHRNLVKLLGCCIEGDEKMLVYEYMSNKSLDVFIFDEELNPKISDFGMARIFGGREDQANTTRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNEHALSLLGFVWIEWRERNILSLINAEIYDHSDHNYISRCIHIGLLCVQELAVDRPTMAAVISMLISEAVFLPPPSQPAFILRQNLLNSKSPVEDQNVLSINMVSITDISGR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01197 750 SUPERFAMILY Protein kinase-like (PK-like) 484 730 IPR011009 -
Trre14g01197 750 SMART blect_4 33 149 IPR001480 -
Trre14g01197 750 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Trre14g01197 750 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
Trre14g01197 750 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Trre14g01197 750 ProSiteProfiles Protein kinase domain profile. 479 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01197 750 Pfam D-mannose binding lectin 73 175 IPR001480 -
Trre14g01197 750 CDD PAN_AP_plant 338 424 - -
Trre14g01197 750 SMART ntp_6 351 423 IPR003609 -
Trre14g01197 750 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Trre14g01197 750 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 694 - -
Trre14g01197 750 Pfam PAN-like domain 351 409 IPR003609 -
Trre14g01197 750 FunFam Uncharacterized protein 491 554 - -
Trre14g01197 750 Gene3D Transferase(Phosphotransferase) domain 1 557 708 - -
Trre14g01197 750 Gene3D - 23 146 IPR036426 -
Trre14g01197 750 CDD B_lectin 33 149 IPR001480 -
Trre14g01197 750 Pfam Protein tyrosine and serine/threonine kinase 484 566 IPR001245 GO:0004672|GO:0006468
Trre14g01197 750 Pfam Protein tyrosine and serine/threonine kinase 568 703 IPR001245 GO:0004672|GO:0006468
Trre14g01197 750 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Trre14g01197 750 Gene3D Phosphorylase Kinase; domain 1 485 556 - -
Trre14g01197 750 PIRSF SRK 3 468 IPR024171 GO:0004674
Trre14g01197 750 PIRSF SRK 481 569 IPR024171 GO:0004674
Trre14g01197 750 PIRSF SRK 566 750 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01197 Trre-Chr14 10201960 10205509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01197 485 750 Receptor kinase-like Gene Family AT3G45860 45.625 6.54e-82 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre14g01197 PK_Tyr_Ser-Thr 2.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01197 - - cam:101513672 1174.46