Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01193 ATGGGTTTCAGCTGCTATTTAAATCTGTTCTTTGTTTTGTTCATTTTGTGTTGCTATTTGTTACATGTTAGTGTTGGTATAGACACCATCACATCATCTCAATTCATCAACGACCCTGAAACACTAATATCCAAAGATGGTACCTTCACCTTGGGATTCTTTAGCCCTGAAAATTCTACAAACCGCTACGTTGGAATTTGGTGGAAGTCTCAATCTACAATCATATGGGTGGCAAACAGAAACCAACCACTGAATGATTCTAATGGGATTGTCACAATATCTGAAGATGGAAACCTTGTGGTATTGAACGGACTGAAACAAGTCATTTGGTCATCGAATGTATCCAGTATAGCCTCCAATACCACGTCCCAGTTTTCAGACAATGGTAACCTTGTCCTTTTGGAGAGCACAACTGGAAACATCTTATGGCAGAGTATTCAGAAACCTTCGGATACATTACTTCCTGGTACGAAGCTTTCTCTCAACAAAAGAACCGGTGAGAAAATCAGACTAAGATCATGGAAAAGCCCTTCTGATCCATCTGATGGGAGTTTCTCTTCTAGTATTGTTGAACGGCGCCGAAAAATACTTGAAGTGTTTATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCTTGGAATGGTCGGGTCTTTACAGGGATAGATGCTATGGTAGTTGCTTATTTTAATGGTTTTCAAGGTGGAGGTGATGGAGAAGGGAATATTAATATATATTATACAATCCCAGATGGTGCAGTTTTCTTGATCTATAACCTGAATTCACAAGGAATTTTAGATGAAAAATCGTGGGATGAGGAGAAGAAAGAAGTGCAAGTTACATGGACTAGCCGAAAATCGGAGTGTGATGTTTATGGTATATGTGGGGCATTTGCAAGCTGTAATTCATTGAGCTCACCAATATGTAGCTGTTTGAGAGGATTTGAACCCCAAAATATACAAGAATGGAATATACATAACTGGACCGGTGGGTGTGTTAGGAGGACACCTTTGCAGTGTGAAAGGGTCAACAATAAAACTACAAGTACTAAAGAATATGGGTATTTGACCACACCAATATGCAGTTGTTTGAAAGGATTTGAGCCCTTGAGCATACAAGAATGGAATAGAAACAACTGGACTGGTGGGTGTGTTAGGAGGACACCTTTGCAGTGTGAAAAAGTCATCAACAAAACCACAACTACAAAGAAAGATGGGTTTTTGAAATTGCGCGCAGTTAAAGTTCCAGATTTTGCAGAAGCTGTAGCTGTGACACCAGATATATGCCGAAACTTATGCTTGGAAAATTGTTCTTGCACTGCGTACTCTAATGATGATGGGATTGGCTGTATGTCTTGGACAGGGAATTTGATTGACATAGAACAGCTCCAAATTGGAGGACTTGATCTATATTTTCGCGTTGCCCATGCAGAGCTTGATAGAAGGGGAAACAAAACAATCATCATTACAATTTCAGTGATAATAGGAACTCTCGCAATTTCCATTTGTGCATATATCATGTGGAGAAGGAACTCAGCTAAACTGTGGCACTCTATCAAATCAACAAGGATAACAAACAACAAAGCTTTTCGACTATTTTATAAAGGTGGAACATCAGAAGTTCATACTTGTGACAATGTAATTGGAAAACTGTCCCAAGTTAAACTACAAGAGCTATTACTATTTGATTTTGAAAAGCTTGCAACCGCCACAAACAACTTCCACTTGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCAGTATACAAGGGGAAACTGCAAGATGGTCAAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGCCAAGGGCTTGAAGAATTCACGAATGAAGTTGTGGTCCTTTGTAAGCTTCAACACCGTAATCTTGTAAGACTTCTTGGCTGCTGTGTTGACGGTGATGAAAAGATGTTGATGTATGAGTACATGCCAAACAAAAGTTTGGACACATTTATATTTGATCCATCAAAAAATAAACTTCTAGATTGGGGAACACGGTATAGAATTATAGATGGAATAGCTCGAGGATTGTTGTATCTTCACAGAGATTCGAGACTAAGAATTATACACAGAGATTTGAAGGTAAGTAATATCTTGTTAGACGAGGAGCTGAATCCAAAAATATCTGACTTTGGTATGGCTAGAATCTTTGGAAGGAGAGAAGATCATGCAAATACTAATAGGGTTGTCGGAACTTATGGCTATATGTCTCCCGAATACGCGATGCAAGGGCATTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGATACTAGAGATCATGACTGGTAGAAGGAACTCAAGCTGTTGTGACAATGAGCATGCTTTGACTCTTTTAGGATTTGTTTGGATTCAATGGAGGGAAGACAATGTTTTATCGTTCATAGATCCAGAAATATATGGTCATAATCATCATAAGAATATTTTGAGATGCATACATATAGGACTTTTATGTGTACAAGAATCGGCCGTAGACAGGCCTACTATGGCAACAGTAATTTCGATGCTTAATAGTGAGGTTGCATCTCTTCCTCCTCCAAATGAACCTGCATTCATCTTTAGGCAGAATATGTATTCAAAGTCGCCCAAAGAAAATGAAAGCATTAACAATGTTAGCATTACAGATGTATATGGCAGATAA 2667 0.3881 MGFSCYLNLFFVLFILCCYLLHVSVGIDTITSSQFINDPETLISKDGTFTLGFFSPENSTNRYVGIWWKSQSTIIWVANRNQPLNDSNGIVTISEDGNLVVLNGLKQVIWSSNVSSIASNTTSQFSDNGNLVLLESTTGNILWQSIQKPSDTLLPGTKLSLNKRTGEKIRLRSWKSPSDPSDGSFSSSIVERRRKILEVFIWNETRPYWRSGPWNGRVFTGIDAMVVAYFNGFQGGGDGEGNINIYYTIPDGAVFLIYNLNSQGILDEKSWDEEKKEVQVTWTSRKSECDVYGICGAFASCNSLSSPICSCLRGFEPQNIQEWNIHNWTGGCVRRTPLQCERVNNKTTSTKEYGYLTTPICSCLKGFEPLSIQEWNRNNWTGGCVRRTPLQCEKVINKTTTTKKDGFLKLRAVKVPDFAEAVAVTPDICRNLCLENCSCTAYSNDDGIGCMSWTGNLIDIEQLQIGGLDLYFRVAHAELDRRGNKTIIITISVIIGTLAISICAYIMWRRNSAKLWHSIKSTRITNNKAFRLFYKGGTSEVHTCDNVIGKLSQVKLQELLLFDFEKLATATNNFHLSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFTNEVVVLCKLQHRNLVRLLGCCVDGDEKMLMYEYMPNKSLDTFIFDPSKNKLLDWGTRYRIIDGIARGLLYLHRDSRLRIIHRDLKVSNILLDEELNPKISDFGMARIFGRREDHANTNRVVGTYGYMSPEYAMQGHFSEKSDVFSFGVLILEIMTGRRNSSCCDNEHALTLLGFVWIQWREDNVLSFIDPEIYGHNHHKNILRCIHIGLLCVQESAVDRPTMATVISMLNSEVASLPPPNEPAFIFRQNMYSKSPKENESINNVSITDVYGR 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01193 888 Pfam D-mannose binding lectin 73 175 IPR001480 -
Trre14g01193 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Trre14g01193 888 SUPERFAMILY Protein kinase-like (PK-like) 557 845 IPR011009 -
Trre14g01193 888 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 351 836 - -
Trre14g01193 888 CDD B_lectin 33 145 IPR001480 -
Trre14g01193 888 SMART ntp_6 402 474 IPR003609 -
Trre14g01193 888 ProSiteProfiles PAN/Apple domain profile. 392 475 IPR003609 -
Trre14g01193 888 Pfam PAN-like domain 401 460 IPR003609 -
Trre14g01193 888 Gene3D Phosphorylase Kinase; domain 1 538 649 - -
Trre14g01193 888 CDD PAN_AP_plant 388 475 - -
Trre14g01193 888 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 650 853 - -
Trre14g01193 888 Pfam Protein tyrosine and serine/threonine kinase 575 844 IPR001245 GO:0004672|GO:0006468
Trre14g01193 888 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Trre14g01193 888 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Trre14g01193 888 Gene3D - 22 147 IPR036426 -
Trre14g01193 888 ProSiteProfiles Protein kinase domain profile. 574 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01193 888 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Trre14g01193 888 FunFam receptor-like serine/threonine-protein kinase SD1-8 548 649 - -
Trre14g01193 888 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
Trre14g01193 888 Gene3D Transferase(Phosphotransferase) domain 1 650 852 - -
Trre14g01193 888 CDD STKc_IRAK 580 846 - -
Trre14g01193 888 PIRSF SRK 1 357 IPR024171 GO:0004674
Trre14g01193 888 PIRSF SRK 350 888 IPR024171 GO:0004674
Trre14g01193 888 SMART blect_4 33 149 IPR001480 -
Trre14g01193 888 SMART serkin_6 574 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01193 Trre-Chr14 10185289 10188699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01193 482 888 Receptor kinase-like Gene Family AT4G21410 50.594 2.44e-128 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre14g01193 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01193 - - tpra:123892367 1347.8