Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01192 ATGGCTTTAAGCAAGTACAAAAATTTGATCTCAGTTTTCAGTTTCATCACATTATTACTATGTTGTTCTTCATCATACGTTGTTGCAACAAACACAACATCATCATCACAAATCATCAAAGACTCAGAAACTCTAACATCAAACAGTGGAAATTTCACCTTAGGATTCTTCACCCCTCAAAATTCCACAAACCGTTATGTAGGAATTTGGTGCAAAACTCAAGTCTTTGTTATATGGGTTGCTAATAGAAATCAACCATTGATCAATGATTCTTTAGGAGTTCTTACAATATCTAATGATGGCAATCTTGTTGTATTGAATGGACAAAAAAATGTTATTTGGTCAACAAATGTTTCTAATGTTACATCAGAAACCAATTCTAGTTTCACACTTTCAGATTATGGAAGTCTTGTCTTTTTGGAAACATCAACAGGAAATACTATATGGGAGAGTTTCAATCATCCTTCAAATGCATTGTTACCAACCATGAAATTTACAAGTAACATGAACCTCACATCATGGAGAACCCCTTTTGATCCGTCCGTCGGAAGCTTCTCTTTTAGCATCGAACGGTTGAAGATTCCGGAAGTTTTTGTTTGGAATGAAACTCGGCCATATTGGCGAAGTGGTCCGTGGAATGGTCAAGTATTTATTGGGATACAAGATATGGGAACGTGGTATCTTAACGGTTTTCATTTTGAGAAAGATAGTACGGGAGGAACTGTTGATTTGTATTTCAGAGTAGATGACTTTGGACTAGTAATCTATGCCTTGAATTCGCAAGGTCAACTTAGTGAAAATTCTTGGAGTATCGAAAAGGAGGAATGGATTGTTACATGGAAAAATCAAAGATCGGATTGCGATGTTTATGGTTTTTGTGGTCCATTTGGAATTTGTAATTCAAAAGGGTCACCAATTTGTAACTGTTTAGAAGGGTTTGAACCAAGAAACAAACAAGAATGGAATAAAAAAAATTGGACTAATGGATGTGTTAGGAAGACACTTTTGCAATGTGAGATTGCCAAAAATCAAAACAAGAGTAAAAATGGTAATGAACCAGATGGGTTTTTGAAATTGAATCATGTAAAAGTGCCTGATTTTGCAGAATTGTCATTGGTTGAACAAGATGAATGCAAAAACCAATGTTTGATGAATTGCTCTTGCAGTGCATATTCATATGCTACTGATATTGGTTGTATGTCTTGGAATGGTAATCTAATTGATATACAACAATTCCAAACCAGAGGAATCGACCTATACATTCGTGTACCCTATGCCGAACTTGGTATATCAGATAAAGGGCATAAACGAACAATTGTCATCACAATTTCGGTATTAACAGGAATTATCATAATTGTGATCATTGTTGCATATTACATTTGCATAAATGCTTCAAACCCTGTGAGAAAAAAGAACAGAATTTTTCAATTCAACAAAATTGAAAAACCTGAAGTATACAATAACAATGTAATTGGAGAATTGTCACAAGAGAAGCTACAAGAGTTATTACTATATAATTTTGAAAAGCTCGCAACTGCAACAAACAACTTCGATTTATCCAACAAACTTGGACAAGGAGGTTTTGGTCTTGTATACAAGGGAATACTGCAAGATGGTAAGGAAATAGCGGTTAAAAGACTTTCTAGATCGTCTGGACAAGGGCTGGAAGAATTCATGAATGAAGTAGTAGTGATTTCTAAGCTTCAGCATCGCAATCTTGTAAGACTTTTAGGCTGCTGTATTGAAGGAGACGAAAAGATGTTGATGTATGAGTACATGTCGAATAGAAGTTTGGATGCATATGTTTTTGATCCGTTAAAAAATAAACTCCTGGATTGGGAAAAACGCTTCAACATTATAGAAGGAATAGCTCGTGGATTGCTTTATCTACACAGGGATTCTAGGCTAAAAATCATACATAGAGATTTGAAGGCGAGTAATATCTTGTTAGATGAGGAGCTGAATCCAAAAATATCGGACTTTGGTATGGCCAGAATCTTTAAAGTGAGTGAAGATCATGCCAATACACAAAGAGTTGTCGGAACATATGGTTATATGGCTCCAGAATATGCAATGCAAGGAGTATTTTCAGATAAATCAGACGTCTTTAGCTTTGGAGTTTTGCTAATAGAGATTGTTTGTGGAAGAAGAAACTCAAGCTTTATTGAAAGTGAAAATGCTATGACTCTGCTAGGAATTGCTTGGATTCAATGGAGGGAAGACAATATTTTAAGTTTAATAGAACCAGAAATATATGATCATTGTGATCAAAATAATATTTTGAGGTGCATACATATAGGACTTCTATGTGTACAAGAATCAGCAGCAGACAGGCCTACTATGGCTGCAGTGGTTTCTATGCTTAATAGTGAAATTATTGACATTCCTCCTGCAAAACAACCTGCATTCCTCTTGATGCAGAATATGATGAATACAGTCTCTTCTGATAAAAGAATTGAATTGTATTCCAATAATGGTTTAAGTATAACAGGCATTCATGGAAGATAG 2508 0.3509 MALSKYKNLISVFSFITLLLCCSSSYVVATNTTSSSQIIKDSETLTSNSGNFTLGFFTPQNSTNRYVGIWCKTQVFVIWVANRNQPLINDSLGVLTISNDGNLVVLNGQKNVIWSTNVSNVTSETNSSFTLSDYGSLVFLETSTGNTIWESFNHPSNALLPTMKFTSNMNLTSWRTPFDPSVGSFSFSIERLKIPEVFVWNETRPYWRSGPWNGQVFIGIQDMGTWYLNGFHFEKDSTGGTVDLYFRVDDFGLVIYALNSQGQLSENSWSIEKEEWIVTWKNQRSDCDVYGFCGPFGICNSKGSPICNCLEGFEPRNKQEWNKKNWTNGCVRKTLLQCEIAKNQNKSKNGNEPDGFLKLNHVKVPDFAELSLVEQDECKNQCLMNCSCSAYSYATDIGCMSWNGNLIDIQQFQTRGIDLYIRVPYAELGISDKGHKRTIVITISVLTGIIIIVIIVAYYICINASNPVRKKNRIFQFNKIEKPEVYNNNVIGELSQEKLQELLLYNFEKLATATNNFDLSNKLGQGGFGLVYKGILQDGKEIAVKRLSRSSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLMYEYMSNRSLDAYVFDPLKNKLLDWEKRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEELNPKISDFGMARIFKVSEDHANTQRVVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIVCGRRNSSFIESENAMTLLGIAWIQWREDNILSLIEPEIYDHCDQNNILRCIHIGLLCVQESAADRPTMAAVVSMLNSEIIDIPPAKQPAFLLMQNMMNTVSSDKRIELYSNNGLSITGIHGR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01192 835 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Trre14g01192 835 SMART ntp_6 351 423 IPR003609 -
Trre14g01192 835 CDD STKc_IRAK 523 789 - -
Trre14g01192 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 593 796 - -
Trre14g01192 835 PIRSF SRK 3 835 IPR024171 GO:0004674
Trre14g01192 835 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Trre14g01192 835 SUPERFAMILY Protein kinase-like (PK-like) 505 815 IPR011009 -
Trre14g01192 835 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Trre14g01192 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Trre14g01192 835 Pfam D-mannose binding lectin 77 170 IPR001480 -
Trre14g01192 835 Pfam PAN-like domain 352 409 IPR003609 -
Trre14g01192 835 ProSiteProfiles Protein kinase domain profile. 517 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01192 835 Pfam Protein tyrosine and serine/threonine kinase 519 788 IPR001245 GO:0004672|GO:0006468
Trre14g01192 835 Gene3D - 25 153 IPR036426 -
Trre14g01192 835 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 779 - -
Trre14g01192 835 ProSiteProfiles PAN/Apple domain profile. 338 424 IPR003609 -
Trre14g01192 835 CDD B_lectin 36 155 IPR001480 -
Trre14g01192 835 Gene3D Phosphorylase Kinase; domain 1 491 592 - -
Trre14g01192 835 Gene3D Transferase(Phosphotransferase) domain 1 593 795 - -
Trre14g01192 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 152 - -
Trre14g01192 835 SMART serkin_6 517 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01192 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 482 592 - -
Trre14g01192 835 SMART blect_4 36 155 IPR001480 -
Trre14g01192 835 CDD PAN_AP_plant 348 424 - -
Trre14g01192 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 214 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01192 Trre-Chr14 10176779 10180127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01192 503 805 Receptor kinase-like Gene Family AT4G23140 58.576 3.69e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre14g01192 PK_Tyr_Ser-Thr 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01192 - - gmx:100777856 999.964