Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01190 ATGAGTTTTAGCATGTGCAATAGTTTAATCTCACTTTCCAAGTTCATCACTTTAATACTATGTTGTTCTTCATCACACGTTGTTGCAACAAACACAACATCATCATCACAAATCATCAAAGACTCCGAAACTCTAACATCAAATAGTGGAAATTTCACCTTAGGATTCTTCGCCCCTCAAAATTCCACAAACCGTTATGTAGGAATTTGGTGCAAAACTCAAGACTTTGTTATATGGGTTGCTAATAGAAATCAACCATTGATCAATGATTCTTTAGGAGTTCTTACAATATCTAATGATGGAAATCAGCTTGTTGTATTGAATGGACAAAAAAAAGTTATTTGGTCATCAAATGTGTCCAATGTTTCAACCAAAACCAATTCTAGTTTCACACTTTTAGATTATGGAAACCTTGTTTTGATGGATACAACAACAAGAAATACTATATGGGAGAGTTTCAAGCACCCTTCAAATGCATTATTTCCAACCATGAAATATACAAGTAACATGAAACTCACATCTTGGAGAACCCCTTTTGATCCGTCCATCGGAAACTTCTCTTTAAGTATCGAACGGGTGAACATTCCAGAAGTTTTCATTAGGAATGAAACTCGGACGTATTGGAGAAGTGGTCCATGGAACAATCAAATCTTTACGGGGATAGAGGACATGAGAAATCCTTATCTTAATGGTTTTCATTTAGAGAAAGATAGTACGGGAGGAACTGTTGATTTATACTTCCGAACAGACGACTATGGACTCATTATCTATGTCCTCAATTCGACAGGTCAAATGCATGAATGGTCGTGGAATACCGAGAAGGAGGAATGGGAGGATACATGGACTAGTCAAAGATCGAATTGCGATGTTTATGGTTTTTGTGGTCCATTTGGAATTTGTAATTCAACAAGGTCACCAATTTGTAGATGTTTGGAAGGGTTTGAACCAAGAAACAAACAAGAGTGGAATCAACAAAATTGGACTAATGGATGTGTTAGGAAGACACTTTTGCAATGTGAGATTGTCAAAAATCAAAACAAGAGTTCAAATGGTAATGAACCAGATGGTTTTTTGAAATTGAATAATGTAAAAGTGCCTGATTTTGCAGAATTGTCATCTGTTGAACAAGATACATGCAAAAATCAGTGTTTGATGAATTGCTCTTGCACTGCATATTTATATGATGCTGATATTGGTTGTATGTCTTGGAATGGAAATCTAATTGATATACAACACTTCCAAAATGGAGGAACTGATCTATACATTCGTGTACCCTATGTCGAACTTGATATATCATCAGATAACGGGCACAAAAGAACAATCATCATTACAGTTTCAGTATTAATAGGAACTATCATAATTGTCATTGCTGCATATTTTATTTGGATAAAGGCTTCAAAGCCAGTAAATAATAAGAAGCATAGACTTTTTCACTTCAACAAATTAGAAAAAGCTGAAGAATCCACTGACAATGTATTTGGAGAATTGTCACAAGCTAAGCTACAAGAGCTATTACTATATAATTTTGAAAAGCTTGCAACCGCTACAAACAATTTCCATGAATCCAACAAACTTGGACAGGGAGGTTTTGGTCCTGTATACAAGGGAATATTGCAAGATGGTAAGGAAATAGCGGTTAAAAGACTTTCTAGATCGTCTGGACAAGGGTTAGAAGAATTCGTGAATGAAGTAGTAGTGATTTCTAAGCTTCAGCACCGCAATCTTGTAAGGCTTTTAGGTTGCTGTATTGAAGGAGACGAAAAGATGTTGATGTATGAGTTCATGCCAAATAAAAGTTTGAATGCATATATTTTTGATCCATCAAGAAATAAACTCTTGGATTGGGAAAAACGCTTCAACATAATTGAAGGAATCGCTCGCGGAATACTTTACCTACATAGAGATTCCAGGCTAAAAATTATACATAGAGATTTGAAGGCGAGTAACATCTTGCTAGATGAGGACCTGAATCCAAAGATATCTGACTTTGGTATGGCTAGAATCTTTGGAGTGAGTGAAGATCGCGCCAATACACAAAGGGTTGTTGGAACGTATGGTTATATGGCTCCAGAATATGCAATGCATGGAGTATTTTCAGATAAATCAGATGTCTTCAGCTTTGGAGTTTTGCTAATCGAGATTGTTAGTGGAAGACGAAACTCAAGCTTTTATGAAAGTGAAAATTCTCTTACTCTCTTAGGATTTGCCTGGATTCAATGGAAGGAAGACAATATTTTAAGTTTAATAGAACCAGAAATATATGATGATAGTCATCATAAGAATATTTTGAGGTTCATACATATAGGACTTCTATGTGTACAAGAATCAGCTGCAGACAGGCCTACTATGGCTGCAGTGATTTCTATGCTTAACAGTGAAACTATGGACATTCCACCTGCAAGAGAACCTGCATTCCTCTTGAGGCAGAACATGATGAAAACAGTCTCTTCTGAAGAAAGAGTTGAATTGTATTCCAATAATGGTTTGAGTATCACAGACATTCATGGAAGATAG 2514 0.3592 MSFSMCNSLISLSKFITLILCCSSSHVVATNTTSSSQIIKDSETLTSNSGNFTLGFFAPQNSTNRYVGIWCKTQDFVIWVANRNQPLINDSLGVLTISNDGNQLVVLNGQKKVIWSSNVSNVSTKTNSSFTLLDYGNLVLMDTTTRNTIWESFKHPSNALFPTMKYTSNMKLTSWRTPFDPSIGNFSLSIERVNIPEVFIRNETRTYWRSGPWNNQIFTGIEDMRNPYLNGFHLEKDSTGGTVDLYFRTDDYGLIIYVLNSTGQMHEWSWNTEKEEWEDTWTSQRSNCDVYGFCGPFGICNSTRSPICRCLEGFEPRNKQEWNQQNWTNGCVRKTLLQCEIVKNQNKSSNGNEPDGFLKLNNVKVPDFAELSSVEQDTCKNQCLMNCSCTAYLYDADIGCMSWNGNLIDIQHFQNGGTDLYIRVPYVELDISSDNGHKRTIIITVSVLIGTIIIVIAAYFIWIKASKPVNNKKHRLFHFNKLEKAEESTDNVFGELSQAKLQELLLYNFEKLATATNNFHESNKLGQGGFGPVYKGILQDGKEIAVKRLSRSSGQGLEEFVNEVVVISKLQHRNLVRLLGCCIEGDEKMLMYEFMPNKSLNAYIFDPSRNKLLDWEKRFNIIEGIARGILYLHRDSRLKIIHRDLKASNILLDEDLNPKISDFGMARIFGVSEDRANTQRVVGTYGYMAPEYAMHGVFSDKSDVFSFGVLLIEIVSGRRNSSFYESENSLTLLGFAWIQWKEDNILSLIEPEIYDDSHHKNILRFIHIGLLCVQESAADRPTMAAVISMLNSETMDIPPAREPAFLLRQNMMKTVSSEERVELYSNNGLSITDIHGR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01190 837 Gene3D Phosphorylase Kinase; domain 1 479 594 - -
Trre14g01190 837 PIRSF SRK 2 837 IPR024171 GO:0004674
Trre14g01190 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 594 - -
Trre14g01190 837 ProSiteProfiles PAN/Apple domain profile. 339 425 IPR003609 -
Trre14g01190 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Trre14g01190 837 CDD PAN_AP_plant 349 425 - -
Trre14g01190 837 Pfam Protein tyrosine and serine/threonine kinase 522 790 IPR001245 GO:0004672|GO:0006468
Trre14g01190 837 SUPERFAMILY Protein kinase-like (PK-like) 503 790 IPR011009 -
Trre14g01190 837 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Trre14g01190 837 Gene3D - 25 154 IPR036426 -
Trre14g01190 837 ProSiteProfiles Protein kinase domain profile. 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01190 837 Gene3D Transferase(Phosphotransferase) domain 1 595 798 - -
Trre14g01190 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Trre14g01190 837 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Trre14g01190 837 SMART serkin_6 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01190 837 CDD STKc_IRAK 525 791 - -
Trre14g01190 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 215 IPR036426 -
Trre14g01190 837 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 781 - -
Trre14g01190 837 SMART ntp_6 352 424 IPR003609 -
Trre14g01190 837 SMART blect_4 36 156 IPR001480 -
Trre14g01190 837 Pfam PAN-like domain 353 410 IPR003609 -
Trre14g01190 837 Pfam D-mannose binding lectin 77 171 IPR001480 -
Trre14g01190 837 CDD B_lectin 36 156 IPR001480 -
Trre14g01190 837 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01190 Trre-Chr14 10159621 10163269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01190 505 837 Receptor kinase-like Gene Family AT4G23140 55.814 5.21e-127 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre14g01190 PK_Tyr_Ser-Thr 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01190 - - gmx:100779455 1017.3