Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01182 ATGCATTTCAGCAACTACACAAATATGTATCTATTCTTCATTTTGAGCATGCTATGTTTTGATTTTTTAGATGTCAGTGTTGCCATAGAAACTATTACATCAACTCAGTTTATCAAGGACCCGGAAACTCTAAGCTCCGAGAATGGTAACTTCGCCTTAGGCTTCTTCAGCACTGAAAATTCTACGAATCGCTATGTCGGAATTTGGTGGCAGCCACAATTCACAGTTGTATGTGTGCTTAACAGAGACCAACCTCTCAAAGATTCTTCTGGTGTTGTTAAAATATCTGATGATGGTAATCTTGTGGTACTGAATGGAAAGAAAGAGTTGATTTGGACATCAAATGTGCCGAATATCGCGACCAAATCAAGTTCTAAACTTTCTGATTCAGGGAACCTTGTACTACTTGAAGGCACAACAGGAAGAACTATATGGGAGAGTTTCCAACATCCTTCAAATGTAATATTACCAACCATGAGAATTACAAGCAACAAAATAACAGGTGAGAAAGTAAAACTCACATCATGGAAAACACGATTTGATCCATCCAATGGAAGCTTCTCTTTAAGCATTGAGCGACTTAGTATACCTGAATTGTTCGTTTGGAATGAAACTGGACCGTATTGGCGCACTGGTCCATGGAGTGGTAAGATATTTACAGGGATTGAATATATGAAACCTTATTATCTCAACGGTAAACATGTTGGAAATGACGGAGAAGGAAATGTTTTCTTCGATGAAACAACAGTGGATACAGTTGGTTTCATAATCTATAATTTGACTTCAGAAGGACATTTTGAAAAGAAATTGTGGGATGAAAAGATAAAAGAATGGAACGTAACATGGAAAAGTCATGAAGTGGAATGTGATGTATATGGTGTATGTGGAACTTTTGCAAGCTGTTATTCAAAAAGCTCGCCGATATGTAGCTGTTTGAAAGGGTTTGAGCCAAGGAACAAAGAGGAATGGAATAGACAGAATTGGACTGAAGGGTGTGTTAGGAGGACAACTCTGCAGCAGTGTGAAAGAGAAAGAAACCGAAACACAATTGCTGATAAAAAATCTGATGGTTTTTTGAAACTGCAGAAGGTAAAAGTTCCTGATTTTGCAGATGGGTCATCTCTAACACTTTCATCAGATACATGCAGAAGCCAGTGTTTGGAGAATTGTTCTTGTGTTGCATATTCATATGATACTGACATAGGTTGTATGTCTTGGACTGGAAATTTAATTGACATACAACAATTCTCAAATACCGGACTTGACTTATATATTCGCGTAGCACACACGGAACTTGATAAAGAGAAAAACATGACAGCCATCATTCTTGTAACAGTTATAGCAGGATCTGGCTTGGTTCTTGCTTGTGCATATATCATGTGGAGAAGGATATCTAACCAGAATGCAAGCAACCAAAGTTACAACACAATTGGAGAGCTGCCACAAGTTAAACTCCATGTGTTATTACTATTTAATTTTGGAAAGCTTGCAACTGCGACCAACAACTTCCACTCATCCAACAAACTTGGGCAGGGTGGTTTCGGTCCAGTCTACAAGGGGACACTGCATGATGGTCAGGAAATAGCAGTTAAAAGACTTTGTAAATCATCCGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGCGGTGATTTCTAAGCTCCAACACCGCAATCTTGTAAGACTTCTTGGCTGCTGTGTTGAAGGTGTGGAAAAGATGCTGATATATGAGTACATGCCAAATAAAAGTTTGGATGCATTTCTCTTCGATCCGTCAGAAAGAAAAACCCTTGATTGGAATAAACGCTTTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCACAGAGATTCAAGGCTAAAAATTATACATAGAGATTTGAAGCCAAGTAATATCTTGCTAGATAATGAGCTTAATCCTAAAATATCAGACTTTGGCATGGCCAAAATCTTTGGAGGTAATGAAGATCAAGAAAATACAAGAAGAGTCGTCGGAACTTATGGCTACATGTCGCCAGAATATGCAATGCAAGGACTATTTTCTGATAAATCTGATGTCTTCAGCTTTGGAGTTTTGCTTCTTGAGATTATTAGTGGAAGACGAAATACAAGTTTTTATGATTGCGAGAATTATCTGACGCTTTTAGGATTCGTGTGGATACAATGGACAGAAGACAATATTTTATCTCTCATAGATCCAGAAATATATGATCCTATCCATTATAAATACATTGTTCGGTCCATACACATAGGGCTTCTGTGTGTTCAGGAATTTTCCATAGACAGACCAACTATGGCTGCTGTAATTTCAATGCTTAATAGTGAGATTGTAGATCTTCCTCCTGCAAAGAAACCTGCATTCACACTGAGACAAAATATGCTAAGCTCGGGGTCATCTGAAGAAAACAATGATGGCTTGCACTCTATCAACTTAGTCAGTATTTCAGACATCCAGGGAAGATAG 2469 0.3807 MHFSNYTNMYLFFILSMLCFDFLDVSVAIETITSTQFIKDPETLSSENGNFALGFFSTENSTNRYVGIWWQPQFTVVCVLNRDQPLKDSSGVVKISDDGNLVVLNGKKELIWTSNVPNIATKSSSKLSDSGNLVLLEGTTGRTIWESFQHPSNVILPTMRITSNKITGEKVKLTSWKTRFDPSNGSFSLSIERLSIPELFVWNETGPYWRTGPWSGKIFTGIEYMKPYYLNGKHVGNDGEGNVFFDETTVDTVGFIIYNLTSEGHFEKKLWDEKIKEWNVTWKSHEVECDVYGVCGTFASCYSKSSPICSCLKGFEPRNKEEWNRQNWTEGCVRRTTLQQCERERNRNTIADKKSDGFLKLQKVKVPDFADGSSLTLSSDTCRSQCLENCSCVAYSYDTDIGCMSWTGNLIDIQQFSNTGLDLYIRVAHTELDKEKNMTAIILVTVIAGSGLVLACAYIMWRRISNQNASNQSYNTIGELPQVKLHVLLLFNFGKLATATNNFHSSNKLGQGGFGPVYKGTLHDGQEIAVKRLCKSSGQGLEEFMNEVAVISKLQHRNLVRLLGCCVEGVEKMLIYEYMPNKSLDAFLFDPSERKTLDWNKRFSIIEGIARGLLYLHRDSRLKIIHRDLKPSNILLDNELNPKISDFGMAKIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNTSFYDCENYLTLLGFVWIQWTEDNILSLIDPEIYDPIHYKYIVRSIHIGLLCVQEFSIDRPTMAAVISMLNSEIVDLPPAKKPAFTLRQNMLSSGSSEENNDGLHSINLVSISDIQGR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01182 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 578 - -
Trre14g01182 822 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Trre14g01182 822 Gene3D Transferase(Phosphotransferase) domain 1 579 781 - -
Trre14g01182 822 ProSiteProfiles PAN/Apple domain profile. 341 428 IPR003609 -
Trre14g01182 822 Pfam Domain of unknown function (DUF3403) 776 822 IPR021820 GO:0004674
Trre14g01182 822 CDD PAN_AP_plant 352 428 - -
Trre14g01182 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Trre14g01182 822 SMART serkin_6 503 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01182 822 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Trre14g01182 822 SUPERFAMILY Protein kinase-like (PK-like) 489 793 IPR011009 -
Trre14g01182 822 CDD B_lectin 35 151 IPR001480 -
Trre14g01182 822 PIRSF SRK 1 822 IPR024171 GO:0004674
Trre14g01182 822 Pfam Protein tyrosine and serine/threonine kinase 505 704 IPR001245 GO:0004672|GO:0006468
Trre14g01182 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Trre14g01182 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 182 IPR036426 -
Trre14g01182 822 SMART blect_4 35 151 IPR001480 -
Trre14g01182 822 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 765 - -
Trre14g01182 822 ProSiteProfiles Protein kinase domain profile. 503 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01182 822 Pfam PAN-like domain 353 413 IPR003609 -
Trre14g01182 822 CDD STKc_IRAK 509 775 - -
Trre14g01182 822 Pfam D-mannose binding lectin 75 177 IPR001480 -
Trre14g01182 822 Gene3D - 25 149 IPR036426 -
Trre14g01182 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 148 - -
Trre14g01182 822 Gene3D Phosphorylase Kinase; domain 1 463 578 - -
Trre14g01182 822 SMART ntp_6 353 427 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01182 Trre-Chr14 10066462 10069669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01182 430 818 Receptor kinase-like Gene Family AT4G05200 49.749 9.84e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre14g01182 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01182 - - tpra:123892366 1093.57