Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01171 ATGGCCGGTCAATTAGCCGCTGCAGCAACAACCGTAACCAACTCTTATCTTCTCCGCCTTCCTTCTCTCCGGAATAAAGATTTGATTCGAGAAAGATGTGTTACACTCTATAGGAAAAAGATTCCTACCATCAAAGCTCTTGCAAGCAGTTCTCTGGGAAAATCAGCTACACAACTCACGGCTGTTTCATCTCCACTATCTACTGATAACCATGGTCCCCTCTCACTCAGTGTTCCCAAATCTCGAAGAACCGGTTCTAGTACCCGTCCACAAGCTTATATATATCATTGGTCTGGCTTTCGAATCCCTGCGAATGCTGAGAAGCCAGAATGGTGGTGGAGGACTTTATCATGTGTACCCTATCTAATAGCACTGCAGATGTCTGCAACTGGGTACTATCTAGAACCTTTACTTGATAAATTCAAATTATTTGAAAATGTGATATTTTATATCCCAGGAGCTGTCAACCGATTGCCAACCTGGTTCCCTATACTATACTGCTATTTGGCTATCGTGGTAGTGGTAAAAAATAAGGACTTCCCCCTTATCTTCAGATTTCATTTAATGATGGGAATGCTACTAGAAATTGCTTTACAGATAGTATGGGTTGCAAGTAATTTCATGCCGCTTATACACTTCAAGGGAACACTTGGGATGTATTACTGGGCTGCTGTGGGTTTGACATATATTATCATAACCATGCATTCCATTAGGTGTGCTCTTCTTGGTACATTTTCAAACATCCCTGTTATTAGTGAATCAGCTTTCCTCCATTCTCTATTTAGTTTAGGAGGGTTCCAGCGGCCGTTTTAG 813 0.417 MAGQLAAAATTVTNSYLLRLPSLRNKDLIRERCVTLYRKKIPTIKALASSSLGKSATQLTAVSSPLSTDNHGPLSLSVPKSRRTGSSTRPQAYIYHWSGFRIPANAEKPEWWWRTLSCVPYLIALQMSATGYYLEPLLDKFKLFENVIFYIPGAVNRLPTWFPILYCYLAIVVVVKNKDFPLIFRFHLMMGMLLEIALQIVWVASNFMPLIHFKGTLGMYYWAAVGLTYIIITMHSIRCALLGTFSNIPVISESAFLHSLFSLGGFQRPF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01171 270 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 35 259 IPR005691 -
Trre14g01171 270 MobiDBLite consensus disorder prediction 63 87 - -
Trre14g01171 270 Pfam Chloroplast import apparatus Tic20-like 86 255 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01171 Trre-Chr14 9937582 9939492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01171 11 269 Chloroplast and Mitochondria Gene Families AT4G03320 46.332 1.31e-79 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01171 - - aprc:113869676 372.859