Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01144 ATGGAGAAATTATATGTTTCAGACTTCCCAGATATCCAATCGATTGATCTGGAATCTTTGCTAGGGAAATCAAAATGCTCTGTTGTATGCAACTTGGTTAATGGCATATTGCTAAAACTGCATCTTCTCAAAGTGACACATTCGGATTCTGATAACAAACATATGAATTCAGTAGAAGGACAACTTAGGACTGTTCTTGTGGCTGTGGAGTCTCAATGTACAGATAAATCCCTCGAATCTTTTCCATCGTCAAATCATATGCATCAACCAATAAATGGCTACAGTGGAGCAACTCATATTCAGGGTAACTACCAGAAATATGAGATAAGGGATGTATCTACTTGTGCGACATACCAGCAAGGACAATGTGTGCCTCTTGAAGTTTCCCAAAATGCTGTGAATGAGTTGGAAACATGCCACGTCGAGCTCAATGTTGTCAAGCGTGATATTTCACTGCTGCATGACTCTATAACTAGTGTAGGATCACAGCTTTTGAAGCTCTCTGTTCGCCCGGATTTTTTGGGTATTGATTCCATTGGTCGACTGTGCTGGGCTTTGGCTACACCCAGAGGACGTTCCCGTATAATTGGATGA 594 0.4125 MEKLYVSDFPDIQSIDLESLLGKSKCSVVCNLVNGILLKLHLLKVTHSDSDNKHMNSVEGQLRTVLVAVESQCTDKSLESFPSSNHMHQPINGYSGATHIQGNYQKYEIRDVSTCATYQQGQCVPLEVSQNAVNELETCHVELNVVKRDISLLHDSITSVGSQLLKLSVRPDFLGIDSIGRLCWALATPRGRSRIIG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01144 197 PANTHER OS02G0192300 PROTEIN 126 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01144 Trre-Chr14 9630045 9630638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01144 127 196 C2H2 Transcription Factor Family AT3G01460 42.857 5.15e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01144 - K22768 gmx:100791814 178.333