Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01127 ATGAGCATAGCTATTGAAGTTGTGGTGGCTCTTGGAGCAGTTTTGGTTGTATTGATCCATTTTTTGTGTGTTTTGGTTTTGAGACCAAAATCATTAAGATCAAAGCTTCATAAGCAGGGTATTTTTGGCCCTTCTCCTCACTTCTTCTTTGGCAATATCCTAGAAATAAAGACACTTTTAATCCAACAACAAGAATCACAAGCCAAACACAAACAAGAAGAAGATGAAGATGTTTGTGTTTCTATATCTCATAACTGGACTTCAAATTTGTTACCTCATATTCACAAATGGAGAAAACAATATGGTCCCACACACTTATTTTCTTCTGGGAATATACAATGGTTAACGGTGACAGATATGGAGATGGTGAAGGAAATTATCCTAAACACCTCTTTGAAACTAGGAAAGCCTTCTTATCTTTCCAAAGATATGGGTCCACTCCTAGGCCAAGGTATAGTATCATCAAGTGGCCTAATTTGGGCTCATCAGAGGAAGATAATCGCGCCTGAATTTTACCTAGACAAGGTGAAGGCAATGATTGATCAAATAGTTGACTCCACAAATATAATGGTAAGATCATGGGAGATTAGAATAGAAAGAGACGGAGTAGTTTCAGAGATTAAAATCGATGAAGATCTGCGAAGCTTGTCTGCTGACATAATTGCTAGAATTTATCCTGGAATTCCGGGCCTTAGATACTTGCCAAATAAAAACAATAGGCAGATATGGAGATTTGAGAAAGAGATTAACTCAAATATATCAAAGCTCGTAAAACAGCGCCAAGAAGAAGGTCGTGAGCAAGATCTCTTGCAAATGATACTTGAGGGTGCAAAGAATTGTGATGGAAATGATGGCCTCTTATCAAATTCAATCTCACAAGACAGATTCATTATAGATAACTGCAAAACTATATTCTTTGCTGGACATGATACTGCTTCAATTACAGCATCGTGGTGCTTAATGCTGTTAGCTACATACCAAGATTGGCAAGATCGTGCTCGTGCAGAGGTGCTTGAAGTTTGTGGAAACGCTAATCCAGATGCAAGTATGCTTAGAAGCATGAAAACGTTAACCATGGTGATTCAAGAGACTCTGAGGCTTTATCCGCCAGCAGTATTTGTCACCAGAACAGCTTTCCAAGATATTAACATAAAAGGTATCGAAGTTCCAAAAGGAATGAATATTCATATTCCAATCTCAATATTGCAACATGACATTGATCTTTGGGGGCCTGATGCCCACGAGTTCAATCCAGAAAGATTTGCGAATGGCGTGATTGGATCCTGCAAGATTCCACAAGCTTATATGCCATTTGGAATAGGCCCCCGTGTCTGTCCCGGACAGCATTTAGCCATGATAGAATTGAAGGTGATTTTGTCTCTCATTCTGCCAAAGTTTCGCTTCTCTCTTTCATCTAGTTATGTTCATTCACCGGTCTATCGTTTGCTTATAGCGCCTGGCAAGGGTGTTGTTCTCAATATGACAAGAATTTAA 1494 0.3902 MSIAIEVVVALGAVLVVLIHFLCVLVLRPKSLRSKLHKQGIFGPSPHFFFGNILEIKTLLIQQQESQAKHKQEEDEDVCVSISHNWTSNLLPHIHKWRKQYGPTHLFSSGNIQWLTVTDMEMVKEIILNTSLKLGKPSYLSKDMGPLLGQGIVSSSGLIWAHQRKIIAPEFYLDKVKAMIDQIVDSTNIMVRSWEIRIERDGVVSEIKIDEDLRSLSADIIARIYPGIPGLRYLPNKNNRQIWRFEKEINSNISKLVKQRQEEGREQDLLQMILEGAKNCDGNDGLLSNSISQDRFIIDNCKTIFFAGHDTASITASWCLMLLATYQDWQDRARAEVLEVCGNANPDASMLRSMKTLTMVIQETLRLYPPAVFVTRTAFQDINIKGIEVPKGMNIHIPISILQHDIDLWGPDAHEFNPERFANGVIGSCKIPQAYMPFGIGPRVCPGQHLAMIELKVILSLILPKFRFSLSSSYVHSPVYRLLIAPGKGVVLNMTRI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01127 497 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 Pfam Cytochrome P450 229 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 Pfam Cytochrome P450 90 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 480 - -
Trre14g01127 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Trre14g01127 497 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 SUPERFAMILY Cytochrome P450 85 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 Gene3D Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01127 497 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01127 Trre-Chr14 9533565 9540770 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01127 122 494 Cytochrome P450 AT5G24900 42.439 1.94e-113 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01127 K24544 - gmx:100780335 721.465