Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01125 ATGAGCATAGATGTTGAAGTTGTGGTGGCACTAGGAGCAATTTTGTTTGGATTGATCCATTTTTTCCATGTTTTGGTTTTGAGACCAAAATCATTAAGAACAAAGCTTCATAAGCAAGGGATTCATGGGCCTACTCCTCACTTTTACTTTGGTAACATCCCACAAATGAAGACACTTATACTTCAACAACAAGAATCATCACAAGCCAAACAAAAACAAGAAGAAGATGAAGATGTTTGTGTTTCTATATCTCATAATTGGACTTCAACTTTGTTCCCTCATATTCACAAATGGAGAAATCAATATGGTCCAATATACTTGTTTTCTACTGGGAGTATACAAAGGTTAATGGTGACAGATATGGAGATGGTGAAGGAAATTATCCTAAACACCTCTTTGAATCTAGGAAAGCCTTCTTATCTTTCCAAAGATATGAGACCACTTTTAGGCCAAGGTATGGTATCATCAAGTGGTCACATTTGGGCTCATCAAAGGAAGATAATTGCTCCTGAATTGTACCTAAACAAGGTCAAGGCAATGGTTGATCAAATAGTGGATTCAACAAATATAATGATAAGGTCTTGGGAGAGTAGAATAGAAAGAGATGGAGTAGTTTCCGAGATTAAAGTCGATGAAGATTTGCGAAGCTTGTCGGCTGATATAATTGCTAGAGCTTGTTTTGGGAGCAATTATGTCCAAGGAAAAGAAATATTCACAAAGCTTAGAGATCTTCTAAAAATTCTCTCCAAGATATATGTTGGAATTCCCGGCTTTAGATACTTGCCAAACAAAAGCAATAGACAGATATGGATATTAGAGAAAGAGATTAACTCAAACATATCAAAGCTCGTAAAACAGCGCCAAGAAGAAGGTCGCGAGCAAGATCTCTTGCAAATGATACTCGAGGGTGCAAAGAATTGCGATGGAAATGATAGCCTCCTATCAAATTCAATCTCACGAGACAGATTCATTATAGATAACTGCAAAACTATATTCTTTGCTGGACATGATACTACTTCAATTACAGCATCGTGGTGCTTGATGTTGTTAGCTACATACCAGGATTGGCAAGATCGCGTTCGTGCAGAGGTGCTTGAAGTTTGTGGAAATGGTAATCCAGATGCAAGTATACTCCGAAGCATGAAAACGTTAACCATGGTGATTCAAGAGACTTTGAGGCTTTATTCACCAATAGTATTTGTTGAAAGAACAGCATTCAAAGATATTAACATAAAAGGTATCAAAGTTCCAAAAGGAATGAATATTCAGATTCCAATTCCAATATTGCAGCATGACATTGATCTTTGGGGTCCCGATGCCCACGAATTCAATCCAGAAAGATTTGCGAATGGCGTGCTTGGAGCCTGCAAGATTCCACAAGCTTATATACCATTTGGAATAGGCTCTCGTGTCTGTCCCGGACAGCATTTATCCACGATAGAATTGAAAGTGATTTTGTCGCTCATTCTGTCAAAGTTTCGCTTCTCTCTTTCATCAAGTTACTGTCATTCACCGGCCTTTCGGTTGCTTATAGAACCTGGTCAGGGAGTTGTTCTAAACATGACAAGAATTTAA 1575 0.381 MSIDVEVVVALGAILFGLIHFFHVLVLRPKSLRTKLHKQGIHGPTPHFYFGNIPQMKTLILQQQESSQAKQKQEEDEDVCVSISHNWTSTLFPHIHKWRNQYGPIYLFSTGSIQRLMVTDMEMVKEIILNTSLNLGKPSYLSKDMRPLLGQGMVSSSGHIWAHQRKIIAPELYLNKVKAMVDQIVDSTNIMIRSWESRIERDGVVSEIKVDEDLRSLSADIIARACFGSNYVQGKEIFTKLRDLLKILSKIYVGIPGFRYLPNKSNRQIWILEKEINSNISKLVKQRQEEGREQDLLQMILEGAKNCDGNDSLLSNSISRDRFIIDNCKTIFFAGHDTTSITASWCLMLLATYQDWQDRVRAEVLEVCGNGNPDASILRSMKTLTMVIQETLRLYSPIVFVERTAFKDINIKGIKVPKGMNIQIPIPILQHDIDLWGPDAHEFNPERFANGVLGACKIPQAYIPFGIGSRVCPGQHLSTIELKVILSLILSKFRFSLSSSYCHSPAFRLLIEPGQGVVLNMTRI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01125 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Trre14g01125 524 Pfam Cytochrome P450 92 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 SUPERFAMILY Cytochrome P450 86 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 Gene3D Cytochrome P450 29 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 515 - -
Trre14g01125 524 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01125 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01125 Trre-Chr14 9527946 9530606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01125 123 521 Cytochrome P450 AT5G24900 47.805 3.77e-132 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01125 K24544 - gmx:100780335 799.275