Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01107 ATGAAAACGTTAACCATGGTGATTCAAGAGACTTTGAGGCTTTATCCACCAGCAACATTTGTTGTCAGAACAGCTTTTCAAAATATAAACATGAAAGGCATCGAAGTTCCAAAAGGAATGAATATTCAGATTCCAATTCCAATATTGCAGCATGACATTGATCTTTGGGGTCCCGATGCCCATAAGTTCAATCCAGAAAGATTTGCGAATGGCGTGCTTGGTGCCTGCAAGATTCCACAAGCTTATATGCCGTTTGGAATAGGCGCACGTGTCTGTGCCGGACAGCATTTAGCCATGATTGAATTGAAGGTGATTTTGTCTCTCATTCTGTCAAAGTTTCGCTTCTCTCTTTCATCAAGTTACTCCCATTCACCGGCCTTTCGTTTGGTTATAGTACCTGGTCATGGAGTTGTTCTTAAAATGTCAAGAATTTGA 435 0.4092 MKTLTMVIQETLRLYPPATFVVRTAFQNINMKGIEVPKGMNIQIPIPILQHDIDLWGPDAHKFNPERFANGVLGACKIPQAYMPFGIGARVCAGQHLAMIELKVILSLILSKFRFSLSSSYSHSPAFRLVIVPGHGVVLKMSRI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01107 144 PRINTS E-class P450 group IV signature 76 92 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 PRINTS E-class P450 group IV signature 51 69 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 PRINTS E-class P450 group IV signature 1 17 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 PRINTS E-class P450 group IV signature 92 110 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 Pfam Cytochrome P450 1 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 SUPERFAMILY Cytochrome P450 1 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 Gene3D Cytochrome P450 1 144 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 85 94 IPR017972 GO:0005506|GO:0016705
Trre14g01107 144 PRINTS P450 superfamily signature 6 17 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 PRINTS P450 superfamily signature 83 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 PRINTS P450 superfamily signature 92 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g01107 144 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01107 Trre-Chr14 9371951 9372568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01107 1 141 Cytochrome P450 AT5G24900 53.191 1.12e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01107 K24544 - gmx:100780335 222.631