Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01105 ATGATGATGGGGGACGCTAGATTATTGGTTGAGAATGGTTTAGACCGATTTGCTTTTCATCGCTACGTGAACGGTCTCAACATTCATGCAGCCTTAGCTGTTGTTCGCGATGAAGCTGGAGATATTGTGGAGCCGATGATAGCACGAGCAACCACTGTTGGACATATCCCACGAGTTAATGTAGGCGATGAGTTCATCTATCAGGCAGAGATGTATCTGGTTGGCTTTCACGATGATTTGATTTGTGGGATATCATTGGGTATACATGTTATTGAGGTAGAGGTGGCCACATGTGCAGTTGCAATCTACCACCTCGATAGCACTTTTCTAGATGAAGATTTGGTCATTTATGGAGCTGAAGAAGGGAATCTAAATGAGACAAATCAACTTAATGTTAGGGTGTTAGCCAATTAG 414 0.43 MMMGDARLLVENGLDRFAFHRYVNGLNIHAALAVVRDEAGDIVEPMIARATTVGHIPRVNVGDEFIYQAEMYLVGFHDDLICGISLGIHVIEVEVATCAVAIYHLDSTFLDEDLVIYGAEEGNLNETNQLNVRVLAN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01105 137 ProSiteProfiles YDG domain profile. 54 137 IPR003105 -
Trre14g01105 137 Gene3D - 39 134 IPR036987 -
Trre14g01105 137 SUPERFAMILY PUA domain-like 47 128 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01105 Trre-Chr14 9363963 9364376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01105 54 129 Su(var)3-9 homologs AT5G04940 32.911 2.89e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01105 - K01873 bna:106381873 51.6026