Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01092 ATGAATTACGGCGGCGAAACGTTGGACTTCCGAAACCTCAAGGTAATATCCGCCGTTGGACGCGGTGCAAAGGGTGTGGTGTTCCTTGCAAGAACCTATGGATCATCGAAAGATGAACGGTGGGCATTGAAAGTTATATCAAAAGAACTTCTTCAGAAGAAAAACAATAACAAAACTGGTGAATGCAAAAGGGTTAGATTTGAACAACAAATACTACGTCGTTTTGATCATCCTCTTTTGCCACGGTTAAAAGGTGTTCTTGAAACTGAGAAACTTACTGGATTCGCCATTGATTATTGTCATGGTGGGAGTTTGCATTCTCTTATGAAGAAACAACCGAACAAAAAATTCTCTGAAGAAACCATTAGGTTCTATGCTGTGGAATTGGTGTTAGCATTGGAGTATTTACACAAACTAGGAGTAGTTTATAGAGATTTGAAGCCCGAGAATATCATGATTCAACAAACGGGACACATAATGCTTGTAGATTTCGACTTATCAAAGAAACTGAATCCAAAATCACCAAATTCACTGAGTTGCAACTCGTCACCAGGTTCCAAATCGCCAGATATGAACACAAGAAAAACGAGATGGTTAACAAAGCTCTATTTTCATTGTAATTCTGGGACACCAAAATATGACACAGTAAATCAACTCGGTTTTAACTCGCCATTTAAAAGAAGCGAGTCAGACTCAGTTGAAAAGTCAAACTCGTTCGTGGGAACCGAAGATTACGTGGCACCTGAAGTTATTTCAGGTCATGGACACAATTTAAGTGTTGATTGGTGGTCATATGGAGTCGTTTTATATGAGATGTTATACGGAACGACGCCGTTTAATAGTGCGAATAGGAAGGAAACGTTTCACAAGATTTTAAATAGTGAGCTTGAACAAAAGGGTGAAACGACGCCATTGAAGGATTTGATTGCTAAATTGCTAGAGAAAGATCCTGACCGTAGGATTCAAGTTGATGAAATAAAGGATCATGATTTCTTTAAAGGTGTGAAGTGGGATACGGTGTTGGAAATTGCACGTCCACCGTATATTCCTCAGAATGAAGTTGTGGACAAAGCTGGGTTTTCTAGAAAAGATGTTGAGTCTTTTGTCCATGGAATATTTTTTCCAAAAAATAAAAATGATAATGGTGAGAAAGAGAAAAATAAGGAGGAGGTGAAAAAAGAAGATGGAAAGGAGAAGGAAAATGGGAATGATGATAGTAGTAATAATAAGAATGTGTGGGTTGAGAAGTTGAGTCAGCAGACTAAAGAGGAGAATTTTTTGATTTTTTGA 1290 0.3806 MNYGGETLDFRNLKVISAVGRGAKGVVFLARTYGSSKDERWALKVISKELLQKKNNNKTGECKRVRFEQQILRRFDHPLLPRLKGVLETEKLTGFAIDYCHGGSLHSLMKKQPNKKFSEETIRFYAVELVLALEYLHKLGVVYRDLKPENIMIQQTGHIMLVDFDLSKKLNPKSPNSLSCNSSPGSKSPDMNTRKTRWLTKLYFHCNSGTPKYDTVNQLGFNSPFKRSESDSVEKSNSFVGTEDYVAPEVISGHGHNLSVDWWSYGVVLYEMLYGTTPFNSANRKETFHKILNSELEQKGETTPLKDLIAKLLEKDPDRRIQVDEIKDHDFFKGVKWDTVLEIARPPYIPQNEVVDKAGFSRKDVESFVHGIFFPKNKNDNGEKEKNKEEVKKEDGKEKENGNDDSSNNKNVWVEKLSQQTKEENFLIF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01092 429 Gene3D Transferase(Phosphotransferase) domain 1 232 351 - -
Trre14g01092 429 Gene3D Transferase(Phosphotransferase) domain 1 104 189 - -
Trre14g01092 429 MobiDBLite consensus disorder prediction 376 415 - -
Trre14g01092 429 PANTHER FLIPPASE KINASE 1-RELATED 8 358 - -
Trre14g01092 429 ProSiteProfiles AGC-kinase C-terminal domain profile. 333 429 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trre14g01092 429 MobiDBLite consensus disorder prediction 377 405 - -
Trre14g01092 429 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Trre14g01092 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Trre14g01092 429 FunFam Serine/threonine-protein kinase OXI1 104 172 - -
Trre14g01092 429 FunFam Serine/threonine-protein kinase OXI1 234 351 - -
Trre14g01092 429 SMART serkin_6 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01092 429 Pfam Protein kinase domain 234 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01092 429 Pfam Protein kinase domain 15 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01092 429 ProSiteProfiles Protein kinase domain profile. 13 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01092 429 SUPERFAMILY Protein kinase-like (PK-like) 12 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01092 Trre-Chr14 9180915 9183204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01092 7 381 AGC Kinase Gene Family AT4G13000 55.703 2.35e-134 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre14g01092 Pkinase 1.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01092 K20714 - gmx:100813693 540.806