Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01061 ATGGTCAAATTAATAGTCTACTTGTGCTTGATCTTGCTTCACATTTTCTTGAGCATTGTTCAAATTCAATCAGCACCAAAAGAGTCTCTCATAACCAAGCTTCCTGGCTTCAGTGGTATTATACCTTCAAAGCACTATGCTGGGTATGTGACAGTGGATGAAAATCATGGAAGAAACTTGTATTACTATTTTGTTGAATCACAAGGGAATCCATCAAAAGACCCTGTGGTTCTATGGCTTAATGGTGGCCCTGCATGTTCTGGCTTTGATGGATTCATATATGAGCATGGCCCTTTTAATTTTATTAAACCAAAGACTAAGGGAGCCTTGCCTACATTGCAACTAAATCCGTACAGCTGGTCAAAGGTTTCCAATATTATATATTTGGACTCTCCTGCTGGAACTGGATTTTCATATTCAAAGAATGTATCTGATTACAAAACTGGTGATATAAGAACTGCTTCTGATACTCATACTTTTCTCCTCAAGTGGTTTAAATTATACCCTGAGTTCCTTGCCAATCCATTATTCATTGCTGGAGAGTCTTATGGTGGAGTTTATGTGCCTACTCTTGCTTATAAAATAGTGCAAGGAATTGAAGCTGGTACTAAGCCCAAATTGAATTTCAAGGGTTATATGGTTGGAAATCCAGTTACTGATCATAAATTTGATGACAATTCTCTTGTTCCTTTTGCACATGGAATGGGTCTTATCTCTGACCAAATATTTGAGGATGTAACAAAAGATTGTAGGGGGAAATTCTATGAATCAGACAGTGTTAATTGCTCACATCAGTTGTCAAAAGTTGATAAGGTACTAAAAAAGGTAAACGTATATGACATTTTGGAACCATGTTATCATGATGGAGAGAAAGAGGAGAATCAAAATTCAAATTCTAAATTGCCATTAAGTTTTAGGCAGTTAAGCAAAACTGATAGACCTATGGCTGTGAGGAAAAGAATGTATGGTCGTGCTTGGCCCTACAAAGTTTCTGTGAAAGATGGAATTGTACCAACTTGGCCACAACTCAATATCTATGTTCCTTGCATTGATGATGAGGTTTCTGTTAATTGGCTCAATAATCACGAGGTCCGAAAAGCTATTCACACTGTGGGGGAAAGTGTGGTGAAGGAATGGGTCTTATGTACAGGCGACGAAGTTAAATACACTCATGATACCGGGAGCATGATTCCGTACCACAAGAAACTAACTTCGAAAGGATATCGCGTTTTAGTTTACAGTGGTGATCATGACATGTGTGTCCCATATACTGGAACTCAAGCATGGACAAGATCAATTGGATATAAGATTGTTGATGAATGGAGACCTTGGTTTGTCAATGATGAAGTTGCAGGGTTTATACAAGGCTATGCCAACAATTTCACATTTCTGACCGTAAAGGGGTCTGGGCATACTGTTCCAGAATATAAACCACGGGAAGCATTGTATTTTTACCAACATTTTATAAATGGGCTGCCTATATAA 1485 0.3805 MVKLIVYLCLILLHIFLSIVQIQSAPKESLITKLPGFSGIIPSKHYAGYVTVDENHGRNLYYYFVESQGNPSKDPVVLWLNGGPACSGFDGFIYEHGPFNFIKPKTKGALPTLQLNPYSWSKVSNIIYLDSPAGTGFSYSKNVSDYKTGDIRTASDTHTFLLKWFKLYPEFLANPLFIAGESYGGVYVPTLAYKIVQGIEAGTKPKLNFKGYMVGNPVTDHKFDDNSLVPFAHGMGLISDQIFEDVTKDCRGKFYESDSVNCSHQLSKVDKVLKKVNVYDILEPCYHDGEKEENQNSNSKLPLSFRQLSKTDRPMAVRKRMYGRAWPYKVSVKDGIVPTWPQLNIYVPCIDDEVSVNWLNNHEVRKAIHTVGESVVKEWVLCTGDEVKYTHDTGSMIPYHKKLTSKGYRVLVYSGDHDMCVPYTGTQAWTRSIGYKIVDEWRPWFVNDEVAGFIQGYANNFTFLTVKGSGHTVPEYKPREALYFYQHFINGLPI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01061 494 FunFam Carboxypeptidase 24 308 - -
Trre14g01061 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Trre14g01061 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Trre14g01061 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Trre14g01061 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Trre14g01061 494 Gene3D - 345 493 - -
Trre14g01061 494 Pfam Serine carboxypeptidase 35 491 IPR001563 GO:0004185|GO:0006508
Trre14g01061 494 FunFam Carboxypeptidase 348 493 - -
Trre14g01061 494 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Trre14g01061 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 461 478 IPR033124 GO:0004185
Trre14g01061 494 SUPERFAMILY alpha/beta-Hydrolases 31 493 IPR029058 -
Trre14g01061 494 Gene3D alpha/beta hydrolase 24 297 IPR029058 -
Trre14g01061 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 478 IPR001563 GO:0004185|GO:0006508
Trre14g01061 494 FunFam Carboxypeptidase 396 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01061 Trre-Chr14 8945296 8952648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01061 358 494 Calmodulin-binding Proteins AT2G22960 45.985 5.12e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01061 K16296 - gmx:100792057 743.036