Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01059 ATGCTGGAGTTTATGTGCCTACTCGATCTTGCTGATAAAATAGTGCAAGGAATTGAAGCTGGAACCAAACCCAAGTTGAATTTCAAGGGTTATTTAGTTGGAAATCCAATTGCTGATGAGAAATTTGATGGAAATGCTCTTGTTCCTTTTGCACACGGGATGGGTCTTATCTCTAATGAAATATTCGAGGACACAACGAGAGAATGCAATGGGACTTTCTACGTAGCATACACCGTTAAATGTATTAATTTGTTGAATAAAGTTGAAAAGGAAATTGAAAAATTAGATAGGTATAACATTTTGGAACCATGTTATCACAATGGAGGGGAAGAGGAGAATAAAAAATCAGATTATAAGTTGCCATTAAGCTTTAGGCAATTAGGTAAGACTGAAAAATCTTTGCCTGTGAGGAAAAGAATGTTTGGTCGTGCTTGGCCCTATAAAGCTATTGTTAAAGATGGTTATGTACCAAGTTGGCCACAACTTACAAGCAAAATTGGTGGTGCTCCTCCTTGTTATGACGATGAGGTTGCAAATGTATGGCTGAATGATCATAAGGTCAGGAAAGCTATTCACACTGCAAAGAAAAATGTGGTCCCCAGGTGGTATCTATGTACTGGTCAACTTAAGTACAAACATGATCTTGGGAGTATGATTCCATACCACAAGAAACTTACTTCCAAAGGATATAGAGCATTAATATACAGTGGTGATCATGACATGTGTATCCCATATACTGGAACTCAAGCATGGACAAGATCAATTGGATATAAGATTGTTGATGAATGGAGACCTTGGTTTGTCAATGATCAAGTTGCAGGCTATATGCAAGGATATGCAAACAATTTCACATTTCTAACTGTAAAGGGATCTGGACATACTGTTCCAGAATATAAACCACAAGAGTCATTATATTTTTACAAACAATTTGTGGATGGATTGCGTATATAG 951 0.3691 MLEFMCLLDLADKIVQGIEAGTKPKLNFKGYLVGNPIADEKFDGNALVPFAHGMGLISNEIFEDTTRECNGTFYVAYTVKCINLLNKVEKEIEKLDRYNILEPCYHNGGEEENKKSDYKLPLSFRQLGKTEKSLPVRKRMFGRAWPYKAIVKDGYVPSWPQLTSKIGGAPPCYDDEVANVWLNDHKVRKAIHTAKKNVVPRWYLCTGQLKYKHDLGSMIPYHKKLTSKGYRALIYSGDHDMCIPYTGTQAWTRSIGYKIVDEWRPWFVNDQVAGYMQGYANNFTFLTVKGSGHTVPEYKPQESLYFYKQFVDGLRI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01059 316 Gene3D alpha/beta hydrolase 6 315 IPR029058 -
Trre14g01059 316 Pfam Serine carboxypeptidase 10 313 IPR001563 GO:0004185|GO:0006508
Trre14g01059 316 SUPERFAMILY alpha/beta-Hydrolases 10 314 IPR029058 -
Trre14g01059 316 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 300 IPR001563 GO:0004185|GO:0006508
Trre14g01059 316 ProSitePatterns Serine carboxypeptidases, histidine active site. 283 300 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01059 Trre-Chr14 8938632 8941512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01059 177 313 Calmodulin-binding Proteins AT2G22960 46.715 1.49e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01059 K16296 - gmx:100792057 429.869