Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01051 ATGGATTTTGTAGAAGTGGATCCGGACAAGGGAAACGAGGCCGCTCATAGCTGTCTAGAAGAGAGTTCAAGTATATTTGATGGAGTTGAAGTTCAAGAGCCATCTGTGGGCATGGAATTTGATTCTGAAGAAGCTGCTAGGAAATTTTATGTTGCATATGCTAGACGGGTAGGATTTGCTGTACGTGTTATGCAACGTCGACGTTCAGGAATTGATGGCAGGACTCTTGCCCGTCGACTTGGATGTAACAAGCAAGGATTTTCATCCAATAGCAAGGGAACATTGGGACAAGATAAAAGACCAAGACCTAGTGCCCGAGAAGGTTGCAAGGCAACAATTTTAGTTAAGATGGAAAAATCTGGAAAATGGGTTGTCACAAGATTTATAAAGGATCACAACCATCCTCTAAATGCTACAGCTAATGGTTTCAGTACAGAAGACGATAAAGATAAGAAAATTGCAGAACTTACTATGGAGTTGGAGCACCAAGATGAACTATGTGCTGCATATAGAGGAAAATTACTCAGCTTCATAAACAATGTTGAGGAGCAAACAGAAGAAATGTCCACAAGAATTCAACTCATTATTAAAAATATAAAGAGAGCTGAATCTGAAATGCAAATATGTTCACAGAATTGA 639 0.3944 MDFVEVDPDKGNEAAHSCLEESSSIFDGVEVQEPSVGMEFDSEEAARKFYVAYARRVGFAVRVMQRRRSGIDGRTLARRLGCNKQGFSSNSKGTLGQDKRPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLNATANGFSTEDDKDKKIAELTMELEHQDELCAAYRGKLLSFINNVEEQTEEMSTRIQLIIKNIKRAESEMQICSQN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01051 212 MobiDBLite consensus disorder prediction 83 106 - -
Trre14g01051 212 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 200 - -
Trre14g01051 212 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
Trre14g01051 212 MobiDBLite consensus disorder prediction 83 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01051 Trre-Chr14 8902738 8903970 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre14g01051 FAR1 5.9e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01051 - - mtr:112416292 365.155