Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01045 ATGCTATTCTTATTTTCAACCTTTCAGGTCATAAAGCTTCTTGCAATATGTTTTGGTGCATTCATAATGGCCTCTTCTACCCATGTTGTTGATTCTTCAACAATGACTATTTCATCATCCATCATCAATGAAAGAATTAGAGAAGCAAGTTCATTGTTGAAGTGGAAAAGCAACCTTGAAATGGAAAGCCAAACCTTGCTATCTTCATGGACAGGCAACAATTCATGCAACTGGCTAGGAATTACATGTGAAGAAGATTACAAATTTGTGTCCAATGTAAATCTCGCAAATATGGGATTAAGAGGTACACTTGAAACTCTTAACTTCTCATCACTTTCAAATATCCTCACTCTTAATATTAGTAACAACTTCTTGAATGGACGTATTCCTCCCAATATCGGGGCGTTGTCTAAACTATCCTATCTTGATCTCAGTAATAATGATCTCACAGGAACAATCCCATATGAAATAACAAAGTTGACCAATCTTCATATTTTATATTTAGATAAAAATATTTTCAATGGTTTCATTCCTAAGGAAATAGGTGCATTAAGAAATCTAAGAGAACTTAGTATTTCGTATGCGAATATCACTGGGACTATTCCTATTTCGGTCAGGAACTTAGCCTTCTTGTCACACTTGAATCTAGGAGGCAACAATCTTATAGGAAACATACCAGAAGAAATTTGGAATTTGAGCAACTTAAAGTACTTAGCAGTTGAAAAAAACAAATTCAATGGTTCTATAATTTCCCAAGATATAGTAAACTTGCATAATCTAGAGACTCTAGATCTTAGCAATAGTGATATTTCCATTATTGGTCCTATCCTAGAAGAATTGTGGAAGTTGAAAAATTTGACATACCTTTCTCTTTCACTTTGCAAAGTTACAGGACATATCCCATTTTCTATAGGAAAGTTGGCTAACTTGGTGCATCTAAATTTAGCAAATAACCAAATTTATGGCCACATTCCTAAGGAAATTGGTAAGTCATTGAACCTAAAATTTCTATATCTTTCAATGAACAACTTATCTGGCTCTATTCCTGTGGAAATTGGTGGATTGATCAACATGAAAAATTTAAGGCTTAGTGACAATAGTCTTTCTGGTTTCATTCCTCATGAAATTGGAATGATGAGAAACTTGGTTGAAATTAATTTGTCCAATAACTCTTTATCAGGTGAAATCCCACGTACAATTGGAAACTTGAGCAAGTTACAAAATCTTACCATATTTACAAACCATCTCACTGGGCCACTTCCTACAGAAATCAACATGCTTTTCAATTTGGTATATTTCTTAATATTTGATAACAATTTCATTGGTCAGCTCCCACACAATATTTGCATTGGTGGAAAGTTGAAATACTTTGCTGTTTTGAAAAACAACTTCACTGGTCCTGTTCCTATGAGTTTGAAGAATTGCTCTAGCATTGTAAGAATTAGGCTTGAACTAAACCAACTTTCTGGAAATATAACAAATTACTTTGGTGTGTATCCAAATTTGTACTATATGCAGTTAAGTGGAAATAAGTTTTATGGCCATATTTCACCCGACTGGGGAAAATGTCGAAGCCTGGCGATCCTTAACATCTCCAATAATAACATATCAGGTGGTATACCGCCAGAACTAGGTGAGGCAACCAAATTATATTCACTTGACCTATCTTCGAACTACCTCACCGGAAAAATTCCGAAGGAGTTAGGCAACTTGACTTCATTGTCCAAACTCTTGATCAGCAACAACCGTCTTTCAGGAAACGTTCCTTTAGAAATAACATCACTAAAGGAACTTGAGACCTTAAATCTTGCAGAAAATGATCTAAGCGGCTATGTCACAAAACAACTTGGATATTTTCCTAGATTATTGAACATGAATTTGAGTCATAACAAATTTAAGGGGAATATTCCTGCTGAGTTTGGCCAATTTAAAGTCATTCGAAGTCTTGATCTCAGTGGGAATTTTTTCGACGGAACAATACCGTTAACACTTGCACAACTGATATACTTAGAGTCATTGAATATATCACATAATAACCTTTTTGGATTTATTCCCTCGAACTTTGATCAGATGCTCAGCTTGTTATCTGTTGACATATCATTTAATCAATTCGAGGGTCCGATTCCAAACATTCCGGCTTTCGATAAAGCTACCATTGAAGTTTTGAGAAATAATAAAGGATTGTGTGGTAATGTCACTGGCTTGGAGCTTTGTCCAGCATCAAGCAGTACTAGATCTCACAATCATAAGATCAATAAAGTCTTATTGATAAGTTTACCTCTTGCAATTGGAACTCTAATACTAGTATTAGTTTGTTTCAAATTCTCTAATCATCTCTGCAAAACTTCAACCACAAGAGAATATCTAGCTCGAGGGAACGTTATTGATACTCAAAACTTATTTACCATATGGAGTTTTGACGGAAAAATGGTGTATGAGAATATTATTGAAGCCACAGAAGATTTCGATGATAAACATCTCATCGGAGTGGGAGGTCATGGAAGTGTTTACAAAGCGGAATTAGAGACCGGTCAAGTAGTTGCGGTGAAAAAACTCCATTCAATAGTAGATGAAGAAAATTCCAACCTAAAATCTTTCACAAGTGAGATCCAAGCTCTGACAGAAATTAGACACCGTAACATTGTAAAGCTACATGGATTTTGTTTGCATTCTCGAGCTTCGTTTTTGGTCTACGAATTCATGGGAAAAGGAAGTGTAGATAACATTTTAAAAGATGATGATCAAGCAATTGCATTTGACTGGAATAAAAGAGTGAATGTCATTAAAGATTTAGCTAATGCTTTATGTTATATGCATCATCATTGCTTGCCTCCAATTGTTCATCGAGATATATCAAGCAAGAATATACTTCTAAATTCTGAATATGTGGCTCATGTTTCTGACTTCGGAATCGCTAAGCTTCTTAATCCAAACTCAACCAACTGGTCCTCATATGCAGGAACCTTTGGATATGCTGCTCCAGAATATGCATATACAATGAAAGTGAATGAGAAATGTGATGTGTATAGTTTTGGGGTGTTAGCATTGGAAATACTTTTTGGAAAACACCCTGGAGGTTTTATATATCATTCCTCACTATCACCTTTGTGGAAAATTATGGGCAACATACTTGATGATATGTCGTTGACGGATAAGTTGGATAAGCGTCTCCCTCATCCTTTGAATCCTATTGTTAACGAGTTAGTATCAATTGCAAGGATAGCTATAGTCTGCTTGACAGAAAGTTCACAATCTCGCCCTACTATGGAGCAGGTCACCAAAGAACTCGCAATGTCATATTTGTCTACAATAGGTTAG 3318 0.3544 MLFLFSTFQVIKLLAICFGAFIMASSTHVVDSSTMTISSSIINERIREASSLLKWKSNLEMESQTLLSSWTGNNSCNWLGITCEEDYKFVSNVNLANMGLRGTLETLNFSSLSNILTLNISNNFLNGRIPPNIGALSKLSYLDLSNNDLTGTIPYEITKLTNLHILYLDKNIFNGFIPKEIGALRNLRELSISYANITGTIPISVRNLAFLSHLNLGGNNLIGNIPEEIWNLSNLKYLAVEKNKFNGSIISQDIVNLHNLETLDLSNSDISIIGPILEELWKLKNLTYLSLSLCKVTGHIPFSIGKLANLVHLNLANNQIYGHIPKEIGKSLNLKFLYLSMNNLSGSIPVEIGGLINMKNLRLSDNSLSGFIPHEIGMMRNLVEINLSNNSLSGEIPRTIGNLSKLQNLTIFTNHLTGPLPTEINMLFNLVYFLIFDNNFIGQLPHNICIGGKLKYFAVLKNNFTGPVPMSLKNCSSIVRIRLELNQLSGNITNYFGVYPNLYYMQLSGNKFYGHISPDWGKCRSLAILNISNNNISGGIPPELGEATKLYSLDLSSNYLTGKIPKELGNLTSLSKLLISNNRLSGNVPLEITSLKELETLNLAENDLSGYVTKQLGYFPRLLNMNLSHNKFKGNIPAEFGQFKVIRSLDLSGNFFDGTIPLTLAQLIYLESLNISHNNLFGFIPSNFDQMLSLLSVDISFNQFEGPIPNIPAFDKATIEVLRNNKGLCGNVTGLELCPASSSTRSHNHKINKVLLISLPLAIGTLILVLVCFKFSNHLCKTSTTREYLARGNVIDTQNLFTIWSFDGKMVYENIIEATEDFDDKHLIGVGGHGSVYKAELETGQVVAVKKLHSIVDEENSNLKSFTSEIQALTEIRHRNIVKLHGFCLHSRASFLVYEFMGKGSVDNILKDDDQAIAFDWNKRVNVIKDLANALCYMHHHCLPPIVHRDISSKNILLNSEYVAHVSDFGIAKLLNPNSTNWSSYAGTFGYAAPEYAYTMKVNEKCDVYSFGVLALEILFGKHPGGFIYHSSLSPLWKIMGNILDDMSLTDKLDKRLPHPLNPIVNELVSIARIAIVCLTESSQSRPTMEQVTKELAMSYLSTIG 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01045 1105 Gene3D Ribonuclease Inhibitor 46 200 IPR032675 -
Trre14g01045 1105 FunFam Nuclear pore complex protein NUP107 45 203 - -
Trre14g01045 1105 SUPERFAMILY L domain-like 74 445 - -
Trre14g01045 1105 ProSitePatterns Tyrosine protein kinases specific active-site signature. 946 958 IPR008266 GO:0004672|GO:0006468
Trre14g01045 1105 FunFam Receptor-like protein kinase 7 205 451 - -
Trre14g01045 1105 FunFam Leucine-rich repeat receptor protein kinase MSP1 785 900 - -
Trre14g01045 1105 PANTHER LEUCINE RICH REPEAT KINASE 2 379 1099 - -
Trre14g01045 1105 Coils Coil 856 876 - -
Trre14g01045 1105 Pfam Protein kinase domain 823 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01045 1105 ProSitePatterns Protein kinases ATP-binding region signature. 828 851 IPR017441 GO:0005524
Trre14g01045 1105 Pfam Leucine rich repeat 185 244 IPR001611 GO:0005515
Trre14g01045 1105 PRINTS Leucine-rich repeat signature 139 152 - -
Trre14g01045 1105 PRINTS Leucine-rich repeat signature 667 680 - -
Trre14g01045 1105 SUPERFAMILY L domain-like 455 730 - -
Trre14g01045 1105 FunFam Uncharacterized protein 452 748 - -
Trre14g01045 1105 Pfam Leucine Rich Repeat 549 571 IPR001611 GO:0005515
Trre14g01045 1105 Pfam Leucine Rich Repeat 381 403 IPR001611 GO:0005515
Trre14g01045 1105 Pfam Leucine Rich Repeat 670 689 IPR001611 GO:0005515
Trre14g01045 1105 Gene3D Phosphorylase Kinase; domain 1 787 900 - -
Trre14g01045 1105 Gene3D Transferase(Phosphotransferase) domain 1 901 1102 - -
Trre14g01045 1105 ProSiteProfiles Protein kinase domain profile. 822 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01045 1105 Gene3D Ribonuclease Inhibitor 413 740 IPR032675 -
Trre14g01045 1105 SMART LRR_typ_2 208 232 IPR003591 -
Trre14g01045 1105 SMART LRR_typ_2 379 403 IPR003591 -
Trre14g01045 1105 SMART LRR_typ_2 667 690 IPR003591 -
Trre14g01045 1105 SMART LRR_typ_2 307 331 IPR003591 -
Trre14g01045 1105 SMART LRR_typ_2 136 160 IPR003591 -
Trre14g01045 1105 SMART LRR_typ_2 427 451 IPR003591 -
Trre14g01045 1105 SMART LRR_typ_2 257 280 IPR003591 -
Trre14g01045 1105 SMART LRR_typ_2 571 595 IPR003591 -
Trre14g01045 1105 SUPERFAMILY Protein kinase-like (PK-like) 796 1096 IPR011009 -
Trre14g01045 1105 FunFam MDIS1-interacting receptor like kinase 2 901 1102 - -
Trre14g01045 1105 Pfam Leucine rich repeat N-terminal domain 48 83 IPR013210 -
Trre14g01045 1105 Gene3D Ribonuclease Inhibitor 201 250 IPR032675 -
Trre14g01045 1105 Gene3D Ribonuclease Inhibitor 334 410 IPR032675 -
Trre14g01045 1105 Gene3D Ribonuclease Inhibitor 251 333 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01045 Trre-Chr14 8856201 8859626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01045 42 994 Receptor kinase-like Gene Family AT4G08850 40.456 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g01045 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01045 - - gmx:100808316 1186.4