Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01025 ATGTCTTTTAATAATCTCGATTCTGGACATCTGTTTGTTGATTTCTTCAAAAACTTGTTAACTCTATCTGTGTGTTTCAGGCATGCAAGAGATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGATTGGCTAGCAGATCAAGTTAACAAGTCGCTTGAAGTGGGTAAACGACGTACCGGAAGATCCATAAGTATCCTCGATATTTACGGATTTGAGTCATTTCAGTTATGCATAACCTATGCCAATGAGAGGCTTCAACAACATTTCAATCGACGTCTTTTTAAACTGGAGCAGCAGGACTACGAAATAGACGGCGTTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGAGTGTTTGGAACTCATTGAGAAGCTATGGGACTGGGGAAGAGGTTTCAGTGTTTGTCATTATGCAGGAGAGGTTTTGTATGATACAAGTGGAGTTCTAGAAAAGAACAAAGATCCAATGCCTTCCGATTCCATTCAAATACTATCATCATGTAGTTGCAAACTGCTGCAACCGTTCTCCAAGACGCTTAACCACCAGTCTCAGAAGCAATCAAATTCTCAGCACGCAGGTGCTTTTGATTCGCAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAATCTTGTTCTCCAGCAACTCAAGTGTTGTGGAGTTTTGGTGGTTATTAG 690 0.4 MSFNNLDSGHLFVDFFKNLLTLSVCFRHARDALAKFIYASLFDWLADQVNKSLEVGKRRTGRSISILDIYGFESFQLCITYANERLQQHFNRRLFKLEQQDYEIDGVDWTKVDFEDNQECLELIEKLWDWGRGFSVCHYAGEVLYDTSGVLEKNKDPMPSDSIQILSSCSCKLLQPFSKTLNHQSQKQSNSQHAGAFDSQKQSVGTKFKGQLFKSCSPATQVLWSFGGY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01025 229 Gene3D - 129 215 - -
Trre14g01025 229 Gene3D - 75 126 - -
Trre14g01025 229 Gene3D Kinesin motor domain 53 74 IPR036961 -
Trre14g01025 229 SMART MYSc_2a 4 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre14g01025 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 213 IPR027417 -
Trre14g01025 229 Gene3D Myosin VI head, motor domain, U50 subdomain 27 52 - -
Trre14g01025 229 ProSiteProfiles Myosin motor domain profile. 1 126 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre14g01025 229 Pfam Myosin head (motor domain) 28 126 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre14g01025 229 Pfam Myosin head (motor domain) 133 213 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre14g01025 229 PANTHER MYOSIN 132 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01025 Trre-Chr14 8705455 8707746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01025 30 214 Myosins gene family AT5G54280 57.018 1.23e-74 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01025 K10357 - gmx:100819335 295.819