Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01013 ATGGAGTTTGTCACTGAACTGTCAAAAGATGTTATCTCAACACTTGGAAAATTGGCAGTGTTGTCTACAATGAAGCAATTTGATTATGTGATCCATCACAAAAATATTATTTCCAAATTGAAGGAAGAACATGACAAGTTGAAGGGTGTGAAAGAAGCAATGCAAGCATGGGTGGACACAAAAAAAATGAACAGAGAAGGAATTGAGCCAAACATACAAAATTGGCTCAATGATATGGAAGCTTTTGAAAATGTGTTACAAAGGACTTTCAGTGAAGAAGAAGTTAAGAAGAATGAGAAATGTTTTGGTGGAAAATGTCCAAATTTGGCAAATAATTATTCTTTGGGAAAGCGTGCTGCTAAAGGCATTGAATATATTGCAAGATTGAAGGAGGAAAAAAAAGAATTTCAGTTCATATCTTACCATAAACCTCCACCAACTGTTGGATCTACCTTCACAGAAGGTATTAAGAGCTTGAAGTCTAGGATGATGATTATGAATCAGGTGATAGAGAAACTGAAAGATGATAAGTTGAAAAGAATAAGCATATGTGGAATGGGTGGAGTGGGGAAAACCACACTTGCAAAAGAACTTATCAAATATGTAGAAAATAATAAGTTATTTGACAAAGTTGTGATGGCAGTGGTATCCCAAAATCCTGATTACAAGAATATCCAAAGTCAAATTGCTGATTGTTTAGGCATGAGTTTGAGAAGTGAAAGTGTGGAAGGAAGAGGAAGAGAAATAATACAGAAATTGAAGGAAATCGATGATGGTGGAAAGACTAATGTCCTAGTTGTGCTCGACGATGTGTGGAGTGAGCTTAATTTTGATAAGGTAGGACTTCCATCTCGAGATGATCAAAAGTGTAGTAAAATAATATTCACATCACGACATGAAAAAGAGTGTCAAAAGATGGGAAGCCAGATGAATTTTGATGTTTCTGTTTTGGTTGAGGATGAAGCTTGGTATCTATTTCAAGCAATTACAGGAGATGTTGTATATGAACCTGACATTTATCCAATAGCGAAACAGGTATCGAGGGAATGTGGAAGCTTACCTCTTGCTATTGTAATTGTTGGAAAGGCGCTCAAGAATGAGAAAAAGCTTACTACATGGGAGGTTGCATTGGAGCAATTAAAAAATTCTCAATCATCTACTTTCTCAGATGTGCACAAATTTGTTTATTCGCGCATCGAGCTTAGTTTGAATTTTTTGGGTAGCATAGAACACAAGAAGTTCCTTATGCTTTGTGGCTTGTTTCCAGAAGATTTTGATATACCTATTGAAAGTTTATCTCGTCATGCAATAGGCTTGGGATTGTTCAAAGTTGATGGTGATACATGGAAAACAATCAATCAAGTGCATCTTTTGGTGGACAATCTAAAGAGATGTTGCTTATTGTTGGATAGCAACGTGCCCGGGTGTGTGAAGATGCATGATATTGTACGTGATGTCGTCATTCTAGTTACATTTAAAACAGATGAACACCGCCAGTTTATGGTGGAGTATGACATGAAGAGGCTCAGAGAAGAGAAACTGGATGACATCAATGCAATATCACTTATCTTGGATGATGAGACAATAGGGTTAGAGGACAAGTTAGAGTGTCCTACACTTCAACTTCTACAACTGCAATCAAAAAGAAAGGAACCAACTCAATGGCCTAAATCTTTCTTCCAAGGAATGAAATCACTTAAAGTTTTGTCTCTGCAAAGTTTGTACATTCCAAAATTTTCAACATTATCTCAAGCTTCAGTTAGCCTGCATACACTGCAAGTAGAATACTGTGATGTTGGAGATATATCTATAATTGGTAAGGAACTTATACACCTAAAAGTCCTAAGCTTTGCACACTCTAATATTAAAGAACTCCCAATTGAAATAGGAAATTTGAGTGTTTTAAGATTATTGGATTTGACAAATTGCAATGATCTTAATGTCATTTCTGCCAATGTCTTGATAAGATTGTCTCAATTGGAAGAACTATATTTGTGGATGTACAATTTTCCTTGGATTAAAAATGATGTGGCTATGAACGAGTTGAAACAGATATCTCATCAACTAAAGGTTGTCGAGATGAAAGTTAGAGAGGTTGAATTTTTAGTCATGGATTTGGACTTATACAACCTGCAAAAGTTTTGGATTTTTGTTGATCCTTATACTCGTTTTCGCCGCTCTGCATATTTGGAGTCAAACTTATTGCAAGTTAGTGCTATTGATTATCAATTTGTTAATAGGATAATGATAGTCTCACATTTGATAAAGAAATGTGAAATCCTTGCAATAAGAAACATGAAAGACTTGAAAAATGTTATGACTCAATTATTATGTGATTGTCCAAGTCCATACTTGAAAGATTTAAGGGTTGATTCATGTCCTGATTTGGTGTTTCTGATAGACACTACTGTTTACTGCAATGGTTTTCCAAATATCCGGTCACTGTCTTTGAAAAATCTTCCGAATTTTAAGGAGATGTGTTATACATCTAATAATGGTGAATTGAATTCACCTCATTGGATGCAACTATTTCCAAAATTGGAAACAATCTTGCTACAAGATTGTTCTTCAATTAATGTGGTGTTTGACACACTTGTAAATGGCCAAGTATTTCCTCAATTGAAAGAAATAGAGATAGCTGGACTCAATCAACTAACACATGTGTGGAGGAGTAATAAAGCTATGCATTGTGTTCAAGGTTTTCAAAATTTGAAAATCTTGACAATATCTTATTGTGACTCTTTGAGACATGTATTTAATCTATCTATTATTGGAGCAATCACCAATATTGAGGAATTGAATATAAAATGTTGCAAGTTGATGGAGTATTTAGTGAGTGATGAAGAAGAAGGAGGAGGAGGAGGTCACAAAAACAAAGAGAAAGAAAACGTCATTTCGTTTGAAAAGTTATATTCCTTAAGACTTTCAAAACTCCCAAGTATTGCTTGTGTTTGTACAAATTCTTATGAGATACAATTTCCATCCTTAAGAAAGTTGGAAATTGATGATTGTCCAAAGCTAGATATATTGGTTTTTCTAGCTACATCTCATTCAAGCATTGAAGGACACAATTCAAGATCTTCTAATTGGCAATTTGGATGTACACCATTTTGTTCTAAGAAAATCAATAAGACTTGTTCCACTTCTGAAAGGAGAACCAAGATAGAGTTTAAGGGTGCAGCTCTTCTTCAAGAACTTAATGTAAAGAATTGTGATTTGCATCAGTGTCTTGTTATAGACAGCTACTTGTATTCAAATTTAAAATCACTAACCGTGTGGGGCTGTGACAGAATAAGTGTCTTGTTATCTTTTTCGTCCATGAGATGTCTTGAGCAACTAGAGAAACTAGACATAACTGAATGCAAAAACTTAAATGAGATAGTATGTCAAGAAGAATTGGAAGCAAATGGAGAAAAGATCATCATCTTCCCTGCATTGCAAGTTCTAATTCTGGAAGACCTTCCAAAACTCAAGGCTTTCTTCCATGGTCCCTATAATCTTAATTTTCCATCACTGCAAAAAGTGTCCATATGCAATTGTCCCGATATGGAAGTGTTTTCACGAGGAGTTTCTAGTATGCCTGAGCTTAAGGATGTCAACATACGGAATGAAACACTCAGCACCAACTCCATACACAAGGATGACATAAATGTCACTATACAACAACACAAGGATGACATGAATGTCACTATACAACAATTTAAAACATTTGTGGAATTACAAAAATGTGAGATGTTGAACTTCAAGGAGCTACTTGATAAAGGCATGTTTGGATACTTTATGAAACAAAAAGCAATGAAGATCACAGATTTTCATAGATTATCAATGCTTGTACCATTCAGTGAGATAAAAATGCTTCAACATGTGAGGGAACTCAATGTAAGTAATTGTGATGCATTGGTTGAAGTGTTTGAATCAGTTACAGAAAAAAGGGATGCCATCACACATTATCAGCTACAAGAGATGGAATTGTATAATTTGCCAAGATTGAGTCACATGTGGAACCACAATATCATAGAGATAGTAAGCTTCAAAAATCTAACAAAATTAGAAGTTAACAATTGCCCCAATTTGAAGAGTTTGCTCTCGTACTCTATGGCTAGAAGCCTTGTGCAACTTCAAACTATAGAAGTTTCGTATTGTGAAATGATGGAGGAGATAATAACAAAGGGAGAGAAATATATAGAAGGAGACAACAAAGTTAAGACTTTACTGCCTAAGTTGGAGGAATTAAGACTTGTTTATCTTCGTAAGTTAGAATGTGTTTGTTCAGTAGATAATGACTATGATATCCCTTTTTTCACTGATGAAGAGGACAACAAATTCAACAATAATGATAAGGTTCAAATTTTATTTCCAGAATTAAAGAAATTAAGTTTTTGTGAAGTACCGAAGCTCAAGTGTTTTTGTTCAGGAGTGTACACCTACGATATCAGGTTTTTGTCAGTCGAAGAGTGTCCAAATATGAGAACCTTTCCCTTTAGAAATGTTATCGTAAACACACCAAACCTTCATCGGCTAAGTTGGGCGCCGGTGGATATGCACACACATGGAGATGTTAATTTGACAATATATTATCACCAGAATCCAGAGAAATACATGGTGGCGTTGCAAAAGTTAAAGACATTTAGAAATATTGTCGACAAAGAGCTTATTGGCTACATCAAAAGAGTAACAAGCCTTGACATTGTAAACTGTCACAAGCTACTGAGTTGCATGCCATCCAACATGATGCAATTATTTTCACATTTGGTTACTCTCTCAGTGAAAGAATGTGATTGCTTAAAAGAGATATTTGAATCAAATGATTACATGTTGCAATGTGAACTATCGGTCTTACGCTTGTTTTCTCTTCCAAAACTAAAGCACGTATGGAAAAATCAAGGTGGTCAAATTGTAGGATTCGAGTGTTTACGAAGTATATCCATTGATCGGTGCAACAATTTGGAACATGTGTTTCCCGATGTTTCTGTGGTCACAAGCCTTCCAAATTTGTATAAGATTTCTGTGCATTATTGTGAGAAGATGAAGAAGATCGTTGAAAATAATAGCAATCCTATTAATTATTTAGGACATAATGCTAGGATCAAATTCCCAAAAAGTTTAACAGATATTAGTCTAATCGGGCTTCCCAGCCTCGAATGTTTCGGTCAAAGCAATTTCCCTTGCTATGTTGAGATGTCAAATTGTAATTGGTTATGGATTGCAGACTGCCCAGAGATGAAGACTTTCTGGCATGATGGAATCTTATACACACCAAATCTTGACCATTTTCATGTGGACGTAAGGTATGAATTCAACAATGAAGATGTGAATGAAGTGTTACAGCGCTATTATAAATGA 5343 0.3519 MEFVTELSKDVISTLGKLAVLSTMKQFDYVIHHKNIISKLKEEHDKLKGVKEAMQAWVDTKKMNREGIEPNIQNWLNDMEAFENVLQRTFSEEEVKKNEKCFGGKCPNLANNYSLGKRAAKGIEYIARLKEEKKEFQFISYHKPPPTVGSTFTEGIKSLKSRMMIMNQVIEKLKDDKLKRISICGMGGVGKTTLAKELIKYVENNKLFDKVVMAVVSQNPDYKNIQSQIADCLGMSLRSESVEGRGREIIQKLKEIDDGGKTNVLVVLDDVWSELNFDKVGLPSRDDQKCSKIIFTSRHEKECQKMGSQMNFDVSVLVEDEAWYLFQAITGDVVYEPDIYPIAKQVSRECGSLPLAIVIVGKALKNEKKLTTWEVALEQLKNSQSSTFSDVHKFVYSRIELSLNFLGSIEHKKFLMLCGLFPEDFDIPIESLSRHAIGLGLFKVDGDTWKTINQVHLLVDNLKRCCLLLDSNVPGCVKMHDIVRDVVILVTFKTDEHRQFMVEYDMKRLREEKLDDINAISLILDDETIGLEDKLECPTLQLLQLQSKRKEPTQWPKSFFQGMKSLKVLSLQSLYIPKFSTLSQASVSLHTLQVEYCDVGDISIIGKELIHLKVLSFAHSNIKELPIEIGNLSVLRLLDLTNCNDLNVISANVLIRLSQLEELYLWMYNFPWIKNDVAMNELKQISHQLKVVEMKVREVEFLVMDLDLYNLQKFWIFVDPYTRFRRSAYLESNLLQVSAIDYQFVNRIMIVSHLIKKCEILAIRNMKDLKNVMTQLLCDCPSPYLKDLRVDSCPDLVFLIDTTVYCNGFPNIRSLSLKNLPNFKEMCYTSNNGELNSPHWMQLFPKLETILLQDCSSINVVFDTLVNGQVFPQLKEIEIAGLNQLTHVWRSNKAMHCVQGFQNLKILTISYCDSLRHVFNLSIIGAITNIEELNIKCCKLMEYLVSDEEEGGGGGHKNKEKENVISFEKLYSLRLSKLPSIACVCTNSYEIQFPSLRKLEIDDCPKLDILVFLATSHSSIEGHNSRSSNWQFGCTPFCSKKINKTCSTSERRTKIEFKGAALLQELNVKNCDLHQCLVIDSYLYSNLKSLTVWGCDRISVLLSFSSMRCLEQLEKLDITECKNLNEIVCQEELEANGEKIIIFPALQVLILEDLPKLKAFFHGPYNLNFPSLQKVSICNCPDMEVFSRGVSSMPELKDVNIRNETLSTNSIHKDDINVTIQQHKDDMNVTIQQFKTFVELQKCEMLNFKELLDKGMFGYFMKQKAMKITDFHRLSMLVPFSEIKMLQHVRELNVSNCDALVEVFESVTEKRDAITHYQLQEMELYNLPRLSHMWNHNIIEIVSFKNLTKLEVNNCPNLKSLLSYSMARSLVQLQTIEVSYCEMMEEIITKGEKYIEGDNKVKTLLPKLEELRLVYLRKLECVCSVDNDYDIPFFTDEEDNKFNNNDKVQILFPELKKLSFCEVPKLKCFCSGVYTYDIRFLSVEECPNMRTFPFRNVIVNTPNLHRLSWAPVDMHTHGDVNLTIYYHQNPEKYMVALQKLKTFRNIVDKELIGYIKRVTSLDIVNCHKLLSCMPSNMMQLFSHLVTLSVKECDCLKEIFESNDYMLQCELSVLRLFSLPKLKHVWKNQGGQIVGFECLRSISIDRCNNLEHVFPDVSVVTSLPNLYKISVHYCEKMKKIVENNSNPINYLGHNARIKFPKSLTDISLIGLPSLECFGQSNFPCYVEMSNCNWLWIADCPEMKTFWHDGILYTPNLDHFHVDVRYEFNNEDVNEVLQRYYK 1780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01013 1780 SUPERFAMILY RNI-like 894 1214 - -
Trre14g01013 1780 FunFam Probable disease resistance protein At1g61300 153 311 - -
Trre14g01013 1780 SUPERFAMILY L domain-like 534 1020 - -
Trre14g01013 1780 PRINTS Disease resistance protein signature 258 272 - -
Trre14g01013 1780 PRINTS Disease resistance protein signature 630 646 - -
Trre14g01013 1780 PRINTS Disease resistance protein signature 350 364 - -
Trre14g01013 1780 PRINTS Disease resistance protein signature 180 195 - -
Trre14g01013 1780 Coils Coil 156 176 - -
Trre14g01013 1780 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1226 1470 - -
Trre14g01013 1780 Gene3D Ribonuclease Inhibitor 795 1021 IPR032675 -
Trre14g01013 1780 Gene3D Ribonuclease Inhibitor 1022 1219 IPR032675 -
Trre14g01013 1780 Gene3D - 150 314 IPR027417 -
Trre14g01013 1780 Gene3D Ribonuclease Inhibitor 1479 1685 IPR032675 -
Trre14g01013 1780 SMART AAA_5 177 322 IPR003593 GO:0016887
Trre14g01013 1780 Gene3D Ribonuclease Inhibitor 531 781 IPR032675 -
Trre14g01013 1780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 415 IPR027417 -
Trre14g01013 1780 SUPERFAMILY L domain-like 1276 1734 - -
Trre14g01013 1780 Gene3D - 316 400 IPR042197 -
Trre14g01013 1780 Gene3D Ribonuclease Inhibitor 1225 1434 IPR032675 -
Trre14g01013 1780 Pfam NB-ARC domain 166 403 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01013 Trre-Chr14 8571466 8577422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01013 161 486 WRKY Transcription Factor Family AT5G45050 27.219 3.08e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01013 - - tpra:123888231 1808.11