Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01011 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGTGACGCAGCGTACCGACGAACCGGTCGATCAACCAGCTTCAATCAGCAGCGAGGTAACACCGGTGGTTCATACGTTAAGGCCGGCACCGGCGCCGCCGCGCCTTCACCATCACTCTCCTCTTCTCGGAGTTTTAACAAGAAGTCTAATAATCATGCACAAGGTGGACCATCTAGGGTAAATCCCACCCAGGCGAATTCAGCCGAGTCTAATTATGCTTCTGCAGTCCGAGCAACACCGAATGGTTCCCATGTACAGCCACAATTTCACGGAGGGTCTGATGCATCAGTTACAAATGCAACTGCCAAGCCGTCTGAATCATCAGCTGCACAGAGGAGCACCAGAGCTGTTCCTAAAGCTCCTATTTCTAAACCTCCCCCCGTGAGTTCTGATTCAGCAGCACCTACAACCCCTGCTAAGGGAGATGCATCCAACGCATTCCCTTTCCAATTTGGATCTATTAGTCCTGGCATTGTGAATGTGATGACAATTCCTGCTCGCACAAGCTCGGCTCCTCCTAATATAGATGAGCAAAAGCGTGATCAGGCTCGTCATGATTCTCTAAGGCCTGTGCCTTCTGTGCCAACACCTACGATTCCAAAGCAGTTGCCAGCAAAAAAGGATACAGGTGTCACCGAACAATCTAAGGTTGGGGAGACTCATACCGGTACAAGGGCAAAAAAGGATACTCAAGTGTCACCTTTACCCCCAGCAAGCCTTATGCAGAATCATTCTGTTGTTCCTCTAACGGGAATGTCGATGCCAATGCCATATCACCACCAGTCACAGGCACCCGTGCACTATGGTGCTGCTAATCCACAAATTCAATCTCATGGTATGTCAACAGCACCTCTTCAGATGCCTTTAATGCCTTTTCCAATTGGAAACGCTGCACAAGTGCAACAACCGGTATTTGTTCCAAGTCTTCAACCTCATCCTATCCATCCTCAAGGAATGATTCATCAACATCAAGGCCAAAATATTGGTTACATTCCTCAAATGGGTCATCAATTTCCCCATCAGTTTGCCAACATGGGTATGGGCATCAACCCACAATATTCCCCACAGCAAGGAGGAAAATTTCCTGGGCCTCGCAAAACTACTCCTGTGAAAATAACTCACCCTGATACCCACGAAGAGCTTAGACTTGATAAAAGGGCAGATGATGGTGGGTCATCAGGTGCTAGGTCTCATTCTAGCATGCCTTCTCAATCTCCATCTGTCAAGCCATTTGCTGCTTCTCATGCCAACGCTCAGCCACCAAGAATTAATTATGCTGTGAACCATGGTCCACAATTATCATCGCATAATACCCTGCCTGGCAATAAAGTTGTTACTTCTATTCCTGGCAATGTTGAACAACGTAGTCAAGAAATTTCTCGTGATATGCCTAATGCAATTTCATCAACTATTTTAGGAGTATCTTCTGTATCTATTAAGCCAAGTGGTGGGTCTGGTGTTGTGGATTCATCATTTGCCAATTCCAGTAATTCTGGTGATCAAAAGGGTGGATCTCCTAGTTCCTCAGTAACATCTAGTGATGTTTACTCTTTGGTGCCGCCAAAAGGACCTGAAACTTGTTCTGAAATCTCTTCCCAACAATCTACTGCTGCATCTGTTTCTGCTGAGAAGCTTACACCAGCTTCCTTGGTGCCTTCTTCAACGGCTTTTAGTGAGAATTCTGTTTCTGCTCTTAATGAAGGCAGAAACAAGGAATCTCTTAGTAGATCAAATTCTTTGAAGGATAATCAGAAGAAACTGGAGAAGAAAGGTCAATTGCAACATCAGGTGGCTGTACAATCTTCTGCTGTGGCTAATGAACCTTCTCTAGCTGTTGATGGTGGTATCTCTGATTGTGTAGTTTCTGAAATTGTAGGAACTAAAACACCCTATTCTGCAGTAACTGCCAATGAAGATCTATCAGCAATAGCTTCTGGCTCATTTTCTGCTACCAGTGAGAGCATGCCTTCTTCTGTTGAAGAGAAGACCACTGGTTCTACACAGGTGTCTGCCAGTGCTTCAGCTGAAGGACCTGTTACTCAAGCTGTTGATAGTTTGAACAATCATAAGATTGATGAGCTAGATGTATTATCTCGAGAGGATAAACAGTTGAGGCAGAACAAATTAGTCGGTAATAAACCTGAAATTTCAACTCTGCAGATAAGTAAAAATGTCAATGATGACGGCGGAGAAATTAGCCACCTCAAAAACGATGCTTCAGAGCTAAGCACTGGGGTTGTAACTTTGAGGACTGGGCTGCAGGTACAGGATGAAATTGAATCTGTAGGTTGCAGCATAGACTGTGACAGGATGGATGATAATTTAGGCACGTCTACTTCTGCAGAGAATTCTAAAGATGCATCTTTAAGCAGAAACGGAAGTGTAGTTGGTAATGAAGTCACTTCTACAGATTATGGCACATCAGATCATCAATCTTCTGGCGATCTTGAAACAAATTTAAAACATTGCAAGGATAGTTCAGAGCATTCTGGCACTGGCTCAGCGTCTCTTCCAGCAGCATCTGTTACTATGGACAGACCTATTTTAGAGCCAAGTAAGGTGAAAGGTACATCAAAGGGGAAGAAGAAACTAAAGGAATTTCTTCAGAAAGCTGATGCTTCTGGATCAACCACTGATCTGTATAACGCGTATAAGGGACCTGAGGAAAAGAAAGAAGCTGTTGCAAGTTCTGAGACTGCTGGAAATTTGAAGCAGCTGCCTACGGATGCTGCTCAGCCAGCTGCTGTTGAAAATGAACAATGTGGGGAGAGTAAGGCTGAACTTGAGGACTGGGAAGATGCTGCCGATATATCCACACCTAAGTTAGAAGTATCAGATAAAACTCAACAGGACAGCAATGGAAGAACTGACAAAAAGTACTCTCGGGATTTCCTTTTAAAATTTGCAGAGCAATGCTCTGAGCTTCCCAAAGGGTTTGAAATCACGGCAGACATAGCTGAAGCTGTGATGGGTTCGAATATTAGTTCCCATGTTATTGTACGCGACGCACATCCTTCTCCCGGAAGAAATACAGATAGGTCAGGTGGGATGCCTCGGATGGATCGTCGTGGGAGTGGTGTTATTGAGGATGATAAATGGAATAAAGTGCCTGGTGCTTTTCATTCTGGCATGCGTTTGGATGGTAGTGGAGGTAATACAGAATTTAGACCTGGTCAAGGAAGCAATTTTGGTGTTTTAAGGAATCCACGCCCACAGGGAGCTATGCAATATGGTGGAGCAATTCTTTCTGGGCCAATGCAATCCATGGGAAACCAGGGAGGAATGCCAAGAAATAGCCCTGATGGAGAAAGGTGGCAGCGTGGTGCTAACTTCCAGCAGAGGGGTTTAATTCCATCTCCTTCTTCTCAATCTCCTTTGCAGACGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAAGTGACAGATGAGGAACAGGCGAAGCAGAGGCAGTTGAAAGGTATATTGAACAAGTTAACTCCCCAGAATTTTGAGAAGCTTTTTGAGCAGGTTAAAGCAGTTAATATTGACAATGTAGTCACTCTCACTGGTGTTATCTCACAAATCTTTGAGAAGGCCTTGATGGAACCCACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCAGCTGCGTTGCCTGATCTCAGTCAAGACAATGAAAAGATAACATTTAAGAGATTATTGTTAAATAAGTGCCAGGAAGAATTTGAGAGGGGTGAGAGAGAGCAAGAAGAAGCTGATAAAGCTGATGAGGGTGAGGTGAAACAGTCTGATGAGGAAAGAGAAGCGAAACGATCCAAGGCTAGAAGACGAATGTTGGGTAATATCAGGTTAATTGGAGAACTATATAAGAAGAGAATGCTGACAGAGAGGATAATGCACGAGTGCATAAAAAAGTTACTGGGTCAGTGTCAGACTCCGGATGAAGAAGATATCGAAGCTTTGTGCAAACTGATGAGTACTATTGGGGAGATGATTGACCACCCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATTAAATTATTGTCAAACAACATGAATTTATCTTCGAGGGTGAGGTTCATGTTAAAGGATACCATTGATTTGAGAAAGAATAGATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCATCGGGATGCTTCCCAAGAGAGGCAATCCCAAGCTGGTAGGCTGGGTCGTGGTATGGGTATTAGTTCACCAAGAAGGACGCCTATGGATTTTGGTTCAAGAGGTTCATCTATGTTATCGCCTCCTAATGCTCAAATGGGTGGATTGCCTAATCAAATTCGTGGGTATGGTTCTCAGGATGTTCGTGGATATGAAAGGCAATCTTATGAGGCTAGGCCACTATCTATTCCCTTGCTTCAAAGATCTTCAGGTGATGAGTTAATAACTTTGGGACCCCAAGGTGGTCTTGCTAGAGGAATGGCCAGTAGAGGTCCACCTGCTGGTTCCAGTTTTGGCGGTCCTAATGGTTACAGTAATTTATCCGAGCGCCCTTCATACAGCCCTAGGGAGGACCTCACACCAAGATATGTTCCAAATAGATTTGCTGGTCCAACTACTTATGATCAATCAAGTGCTCCCGAGCAAAGTGTGAATTACAGTAACAGGGATTTGGGAAATGCAGATAGGTTTCTTGATAGACCTGTTGTACATCCACCTCCTGCCCGAGCACAAGAGACAGCACTCTCCCAGAATACCTCTTCAGAAAAGGGTTTGTCAGATGCGAAACTACAGAACATGTCCATGGCAGCAATTAAAGAATACTATAGTGCTAGAGATGTGAACGAAGTTGTTTTGTGCATCAAAGATCTGAACTCTCCAAGCTTTCATCCTTCCATGGTTTCTCTTTGGGTGTCAGATTCATTTGAGAGAAAGGATACAGAGAGAGATCTTTTGGCCAAATTGTTGATTGACCTTGTGAAATCTCACGGCGGTACCTTAAGTCAAACCCAGCTCATCAAAGGGTTTGAATTTGTTCTAAGTACTTTGGAAGATGTGGTTACGGATGCCCCAAGAGCACCGGAGTATCTTGGTCGCATTTTTGCCAAAGCTATAACAGAGCATGTAGCCTCTTTGAAAGAGATTGGGCAGTTAATACGTGACGGCGGAGAGGAATCAAGTAGCCGCTTACAAATTGGACTTTCAGCTGACATTCTCGGAAGTACCTTGGAAGTGATACAAACTGAGAAGGGCGATGCATTCTTGAATGAGATCCAGACAAGCTCCAACTTGCAATTGCAGACCTTCCGTCCGCCAGAACCTATTAAATCCCGGAAACTAGAAAAATTCCTTTAG 5364 0.4415 MSFNQSKSDKSDAAYRRTGRSTSFNQQRGNTGGSYVKAGTGAAAPSPSLSSSRSFNKKSNNHAQGGPSRVNPTQANSAESNYASAVRATPNGSHVQPQFHGGSDASVTNATAKPSESSAAQRSTRAVPKAPISKPPPVSSDSAAPTTPAKGDASNAFPFQFGSISPGIVNVMTIPARTSSAPPNIDEQKRDQARHDSLRPVPSVPTPTIPKQLPAKKDTGVTEQSKVGETHTGTRAKKDTQVSPLPPASLMQNHSVVPLTGMSMPMPYHHQSQAPVHYGAANPQIQSHGMSTAPLQMPLMPFPIGNAAQVQQPVFVPSLQPHPIHPQGMIHQHQGQNIGYIPQMGHQFPHQFANMGMGINPQYSPQQGGKFPGPRKTTPVKITHPDTHEELRLDKRADDGGSSGARSHSSMPSQSPSVKPFAASHANAQPPRINYAVNHGPQLSSHNTLPGNKVVTSIPGNVEQRSQEISRDMPNAISSTILGVSSVSIKPSGGSGVVDSSFANSSNSGDQKGGSPSSSVTSSDVYSLVPPKGPETCSEISSQQSTAASVSAEKLTPASLVPSSTAFSENSVSALNEGRNKESLSRSNSLKDNQKKLEKKGQLQHQVAVQSSAVANEPSLAVDGGISDCVVSEIVGTKTPYSAVTANEDLSAIASGSFSATSESMPSSVEEKTTGSTQVSASASAEGPVTQAVDSLNNHKIDELDVLSREDKQLRQNKLVGNKPEISTLQISKNVNDDGGEISHLKNDASELSTGVVTLRTGLQVQDEIESVGCSIDCDRMDDNLGTSTSAENSKDASLSRNGSVVGNEVTSTDYGTSDHQSSGDLETNLKHCKDSSEHSGTGSASLPAASVTMDRPILEPSKVKGTSKGKKKLKEFLQKADASGSTTDLYNAYKGPEEKKEAVASSETAGNLKQLPTDAAQPAAVENEQCGESKAELEDWEDAADISTPKLEVSDKTQQDSNGRTDKKYSRDFLLKFAEQCSELPKGFEITADIAEAVMGSNISSHVIVRDAHPSPGRNTDRSGGMPRMDRRGSGVIEDDKWNKVPGAFHSGMRLDGSGGNTEFRPGQGSNFGVLRNPRPQGAMQYGGAILSGPMQSMGNQGGMPRNSPDGERWQRGANFQQRGLIPSPSSQSPLQTMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNVVTLTGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEADKADEGEVKQSDEEREAKRSKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQCQTPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERIKLLSNNMNLSSRVRFMLKDTIDLRKNRWQQRRKVEGPKKIEEVHRDASQERQSQAGRLGRGMGISSPRRTPMDFGSRGSSMLSPPNAQMGGLPNQIRGYGSQDVRGYERQSYEARPLSIPLLQRSSGDELITLGPQGGLARGMASRGPPAGSSFGGPNGYSNLSERPSYSPREDLTPRYVPNRFAGPTTYDQSSAPEQSVNYSNRDLGNADRFLDRPVVHPPPARAQETALSQNTSSEKGLSDAKLQNMSMAAIKEYYSARDVNEVVLCIKDLNSPSFHPSMVSLWVSDSFERKDTERDLLAKLLIDLVKSHGGTLSQTQLIKGFEFVLSTLEDVVTDAPRAPEYLGRIFAKAITEHVASLKEIGQLIRDGGEESSSRLQIGLSADILGSTLEVIQTEKGDAFLNEIQTSSNLQLQTFRPPEPIKSRKLEKFL 1787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1384 1405 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 403 422 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 559 604 - -
Trre14g01011 1787 Coils Coil 580 600 - -
Trre14g01011 1787 Gene3D - 1159 1394 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1025 1046 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1384 1445 - -
Trre14g01011 1787 FunFam Eukaryotic translation initiation factor 4G 1593 1786 - -
Trre14g01011 1787 Pfam MA3 domain 1606 1710 IPR003891 -
Trre14g01011 1787 Coils Coil 1241 1261 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1581 1596 - -
Trre14g01011 1787 SUPERFAMILY ARM repeat 1153 1383 IPR016024 -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 381 402 - -
Trre14g01011 1787 Gene3D - 1591 1787 - -
Trre14g01011 1787 SMART ma3_7 1600 1714 IPR003891 -
Trre14g01011 1787 SMART if4_15 1159 1381 IPR003890 GO:0003723|GO:0005515
Trre14g01011 1787 MobiDBLite consensus disorder prediction 493 544 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 785 824 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 17 34 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1 151 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 44 124 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 438 457 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 178 251 - -
Trre14g01011 1787 FunFam Eukaryotic translation initiation factor 4G 1159 1394 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1251 1279 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1509 1523 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 785 872 - -
Trre14g01011 1787 Pfam MIF4G domain 1159 1380 IPR003890 GO:0003723|GO:0005515
Trre14g01011 1787 MobiDBLite consensus disorder prediction 658 686 - -
Trre14g01011 1787 ProSiteProfiles MI domain profile. 1599 1723 IPR003891 -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1540 1560 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 932 950 - -
Trre14g01011 1787 SUPERFAMILY ARM repeat 1593 1782 IPR016024 -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1011 1046 - -
Trre14g01011 1787 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 362 1787 IPR045208 GO:0003743
Trre14g01011 1787 MobiDBLite consensus disorder prediction 493 526 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 559 583 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1426 1444 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 1491 1596 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 584 602 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 887 967 - -
Trre14g01011 1787 MobiDBLite consensus disorder prediction 359 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01011 Trre-Chr14 8561716 8570084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01011 1 1786 Eukaryotic Initiation Factors Gene Family AT3G60240 43.595 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01011 K03260 - gmx:100796636 2364.34