Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01010 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACACAGCGTACCGACGAACCGGTCGATCAACCAGCTTCAATCAGCAGCGAGGTAATACCGGCGGTGGTTCATACGTTAAGGCCGGCACCGCCGTGCCTTCTCCCTCACTCTCTTCTTCTCGAAGTTTTAACAAGAAGTCTAATAATCATGCACAAGGTGGAGGACCATCTAAGGTAGTAAACCCTACCCCAGTGAATGCTGCGAATTCAGCTCCAATTAATTATGCTTCTGCAGTCCGAGCAACCCCGAATGGTTCCCATATACAGCCACAATTTCATGGCGGTTCTGATGCATTGGCTACAAATGCAACTGCCAAGCCGTCTGAATCATCAGCTGCACTGAGGAGCACAAGAGTTGTTCCTAAAACTCCCATTTCTCAACCTCCTCCCGTGAGTTCTGATGCTGCAGCTCCTACGACTCCTGCTAAGGGAGATGCATCCAAAGCATTCCCTTTTCAATTTGGATCTCTTAGTCCTAGCGTTATGAATGTGGTGAAAATTCCTGCTCGTACAAGCTCGGCTCCTCCTAATATAGATGAGCAGAAACGTGATCAGACTCGTCATGATTCTTCAAGGCCCGCGCCTTCTCTGCCAATACCTCCTGTTCCAAAGCAGCTTCCAGCAAGTAAGGATACAAGTGTGTCCGACCAATCTAAGGGTGGGGAAACTCATACTGGTACAAGGACAAAAAAGGATGCTCAAGTGTCACATTTACCCCCAGCAAGCTTGATGCAGAAGCCTTCTGTTGTTCCTCTAACTGGGATTTCAATGCCAATGTCAACGCCATATCACCAGTCACAGGCACAGGCACCTCTACACTTTGGTGTTCTTAATCCACAGATTCAACCTCATGGTATGTCAACGGCATCTCTTCAGGGGCCTTTACCAATTGGAAACGCTGCTCAAGTGCAACGCCAGGTATTCGTTCCAGGTCTTCCACCCCATCCTATGCATCCTCAAGGATTTATGCATCAAGGCCAAAATATAGGTTACAGTCCTCAAATGGGTCATCAATTGTCCCATCAGTTTGGCAACATGGGTATAGGCATCAACCCACAATATTCCCCCCAGCAAGGAGGAAAATTTGCTGGACCTCGTAAAACTACTCCTGTGAAAATAACTCACCCTGATACCCATGAAGAGCTTAGACTTGATAAAAAGGAAGATGATAATGGGTCATCTGGTGCTAGGTCTCATTCTAGCCTGCCTTCTCAATCTCCGCCTGTCCAATCATTTCCAGCTTCTCATCCTATCAGTTACTATCAATCCAATTCTCCCTTTTATCAAACTCCTAGTTCTCTTCCTTTATCAAGTAGCCAGATAACCCCCAACACTCAGCCACCAAAATTAAATTATGCAGCGAGCCATGGTCCACAAAATGTTGGTCTCACAAATTCATCGTCTCATAATTCCCTGCCTGTTAATAAAACTGCCACTTCTATTTCTGGCAATGTTGAACCACCTAAACAAGAATTTTCCCGTGATGTGTCTAATGCAATCTCATCAGCTATGTCAGGAGCATCTTCTGTGTCTATAAAGCCAAATGTTGGGTCTGCCGTTGTGGTCTCATCATTTGCCAATTCAATTTCGGGTGCTCAAAAGGATGGATCTCTTAGTTCCTCCACAACATCTAGTGATGCTTGCTCTTTCGTGCCACCAAAAGGGTCTGAAACTTATTCCAAAATCTCTTCAGAACAATCTACTGCTGAGAAGCTTATATCATCTTCCTTGTTACCTTCTTCACCTGCTTTGAGTGAGGATTCTGTTCCAGTATTATCTAATAATGAAGGCAGAAAAAAGGAATCTCTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAAGGACCATTGCAGCATCAGGTGGCTGTACAATCATCTGTGGCTAATGAACCTTCCCTAGCTGTTGATGGTGGCATCTCTGATTGTGTAGCTTCTGAAACTGTAGGAACTAAAACAATCCATTCTGCAGCAATTGCCAGTGAAGATTTATTAGCAGCAGCTTCAGGCCCAATATCAGCTACCAGTAAGAGCTTGCCTTCTACGACACTTGAAGAAACAACCAGTGGTTCTACACAGGTCTCTGCTTGTGCTTCAGCTGAAGGACCTGTTACTCAAGCCGCAGATAGTTTGGACAATCATAAGAGTGCTGAGGTAGATGAATTATCCCAAGAGGATAAACTGTTAAGACAGAATGATAGTGTACTTAGTAATGAAGCTATTTCTTCAACTTCTGGCTCATCAGATCAGCAATCTTCTGGTCTTTTAGAAACAACTTCAAAACATTGCAAGGATAGTTCAGAGGATACTATTGCTGGTAGTGGCTCGGTGTCTCGTCCAGCAGCACCGGGTACTATGGACGGACCAATTTTAGAGCCAAGTAAGGTAAAAGGTACATCAAAGGGGAAAAAGAAACGAAAGGAATTTCTTCAGAAAGCAGATGCTTCTGGGTCAACAGCTGATCTGTATAACGCATATAAGGGACCTGAGGAAACGAAAGAAGCTGTTGCAAGTTCAGAGAGCACTGCCAATGTTTCTACTTCTGGAACTTTGAAGAAGTTGCCTGTGGATACTGCTCAGACAGATGCAGTTGCAAATGAACTTGAGGACTGGGAGGATGCTGCTGACATGTCCACTCCAAAACTTGATGTATCAGATAAAACTCAACAGGTTAGTGACGGAAGTGCAGTTACTGACAAAAAGTACTCTCGAGATTTCCTTTTGAAATTTGCCGAGAATTGCACTGGTCTTCCTGAAGGGTTTGAAATCACGGCAGACTTAGCTGAGGCTTTGATGACTTCTAATGTTAGTTCCCATGTTATTGTGCATGACTCACATCCTTCTCCTGGAAGAAAGACAAATAGGTCAGGTGGGATGTCTTGGATGGATCGTCATGGGAGTGGTGTTATTGAGTATGATAAATGGAATAAAGTGCCTGGTGCTTTTCATTCTGGCATGCGTTTGGATGGTAGTGGAGGTAATACAGAATTTAGACCTGGTCAAGGAAGCAATTTTGGTGTTTTAAGGAATCCACGCCCACAGGGAGCTATGCAACATGGTGGAGGGATTCTTTCTGGGTCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAAGAATAGCCCTGATGGAGAAAGGTGGCAGCGTGCTGCTAACTTCCAGCAGAGGGGTTTAATTCCATCTCCTTCTCAATCTCCTTTGCAGACGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAGGCAAAACAGAGGCAGTTGAAAGGTATACTGAACAAGTTAACTCCCCAGAATTTTGAGAAGCTTTTTGAGCAGGTTAAAGCAGTTAATATTGATAATGTAGTTACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCCTTGATGGAACCCACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCAGCTGCGTTGCCTGATCTCTGTCAAGACAATGAAAAGATAACATTTAAGAGATTATTGTTAAATAAGTGCCAGGAAGAATTTGAGAGGGGTGAGAGAGAGCAAGAAGAAGCTAATAAAGCTGATGAGGGTGAGGTGAAACAGTCTGATGAGGAAAGAGAAGCAAAACGATCCAAGGCTAGAAGACGAATGTTGGGTAATATCAGGTTAATTGGAGAACTATATAAGAAGAGAATGCTGACAGAGAGAATAATGCACGAGTGCATACAAAAGTTGTTGGGTCAGTGTCAGAATCCGGATGAAGAAGATATTGAAGCTTTGTGCAAACTGATGAGTACTATTGGGGAGATGATTGACCACCCCAAAGCCAAGGAGCACATGGATGTATATTTTGAAAGAATTAAATTATTGTCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTAAAGGATACCATTGATTTGAGAAAGAATAGATGGCAACAAAGGAGAAAAGTTGAAGGCCCAAAGAAGATTGAAGAGGTGCACCGGGATGCTTCCCAAGAGAGGCAATCCCAAGCTGGTAGGCTCGGTCGTGGTATGGGTATTAGTACACAAAGATGGACCCCTATGGATTTTGGTTCAAGAGGCTCATCTATCTTATCCCCTCCTAATGCTCAGATGGGTGGATTGCCTAATCAAATGCGTGGGTATGGTTCTCAGGATGTTCGTGGATATGAAAGGCAATCTTATGAGGCTAGGCCACTATCTATTCCCTTGCTGCAAAGATCTACAGGTGATGAGTTAATAACCTTGGGACCCCAAGGTGGTCTTGCTAGAGGAATGGCCAGTAGAGGTCCACCTGCCGCTTCCAGTTTTGGCGGTCCTAATGGTTACGGTAATTTATCGGTGCGCCCTTCATACAGCCCTAGGGAGGACCTCACTCCAAGATATGTTCCAGATAGATTTTCTGGTCAGACTACTTATGATCAATCAAGTGTTCTAGAGCAGAATATGAATTATGGTAACAGGGATTTGAGAAATGTAGATAATAGGATTCTTGATAGACCTGTTGTAAACCCACCTCCTGCCCGAGCACAAGAAACATCAGACTTCCAGTATACGTCTTCAGAAAAGAGTTTGTCAGAAGAGCGACTGCAAAACATGGCAATGGCAGCAATTAGAGAATATTATAGTGCTAGAGATGTAAACGAAGTTGTTTTGTGTGTCAAAGATCTGAACTCTCCAAATTTTCATCCTTCCATGGTTTCTGTTTGGGTCACAGACTCATTTGAGAGGAAGGACACAGAAAGAGATCTTTTGGCCAAACTGCTGATCGATCTTGTAAAATCTCATGGTGGCACCCTAAGTCAAGCCCAGCTCATTGGAGGGTTTGAATCTGTTTTAAATACTTTGGAAGATGGGGTTACGGATGCCCCAAAAGCACCAGAGTTTCTTGGCCGCATTTTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGGAGGAGATTGGGCGGTTAATACACAATGGTGGAGAAAGCCTCTTACAAATTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTGGAAGTGATACAAACTGAGAAGGGTGATTCTTTTTTGACCGAGATCCAGAGAAGCTCCAACTTGCAATTACAGACTTTCCGGCCACCAGCACCGATTAAATCACGAAAACTAGAAAAATTCATTTAG 5184 0.4369 MSFNQSKSDKSDTAYRRTGRSTSFNQQRGNTGGGSYVKAGTAVPSPSLSSSRSFNKKSNNHAQGGGPSKVVNPTPVNAANSAPINYASAVRATPNGSHIQPQFHGGSDALATNATAKPSESSAALRSTRVVPKTPISQPPPVSSDAAAPTTPAKGDASKAFPFQFGSLSPSVMNVVKIPARTSSAPPNIDEQKRDQTRHDSSRPAPSLPIPPVPKQLPASKDTSVSDQSKGGETHTGTRTKKDAQVSHLPPASLMQKPSVVPLTGISMPMSTPYHQSQAQAPLHFGVLNPQIQPHGMSTASLQGPLPIGNAAQVQRQVFVPGLPPHPMHPQGFMHQGQNIGYSPQMGHQLSHQFGNMGIGINPQYSPQQGGKFAGPRKTTPVKITHPDTHEELRLDKKEDDNGSSGARSHSSLPSQSPPVQSFPASHPISYYQSNSPFYQTPSSLPLSSSQITPNTQPPKLNYAASHGPQNVGLTNSSSHNSLPVNKTATSISGNVEPPKQEFSRDVSNAISSAMSGASSVSIKPNVGSAVVVSSFANSISGAQKDGSLSSSTTSSDACSFVPPKGSETYSKISSEQSTAEKLISSSLLPSSPALSEDSVPVLSNNEGRKKESLSRSNSLKDNQKKGPLQHQVAVQSSVANEPSLAVDGGISDCVASETVGTKTIHSAAIASEDLLAAASGPISATSKSLPSTTLEETTSGSTQVSACASAEGPVTQAADSLDNHKSAEVDELSQEDKLLRQNDSVLSNEAISSTSGSSDQQSSGLLETTSKHCKDSSEDTIAGSGSVSRPAAPGTMDGPILEPSKVKGTSKGKKKRKEFLQKADASGSTADLYNAYKGPEETKEAVASSESTANVSTSGTLKKLPVDTAQTDAVANELEDWEDAADMSTPKLDVSDKTQQVSDGSAVTDKKYSRDFLLKFAENCTGLPEGFEITADLAEALMTSNVSSHVIVHDSHPSPGRKTNRSGGMSWMDRHGSGVIEYDKWNKVPGAFHSGMRLDGSGGNTEFRPGQGSNFGVLRNPRPQGAMQHGGGILSGSMQSMVNQGGMQKNSPDGERWQRAANFQQRGLIPSPSQSPLQTMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNVVTLTGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLCQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREAKRSKARRRMLGNIRLIGELYKKRMLTERIMHECIQKLLGQCQNPDEEDIEALCKLMSTIGEMIDHPKAKEHMDVYFERIKLLSNNMNLSSRVRFMLKDTIDLRKNRWQQRRKVEGPKKIEEVHRDASQERQSQAGRLGRGMGISTQRWTPMDFGSRGSSILSPPNAQMGGLPNQMRGYGSQDVRGYERQSYEARPLSIPLLQRSTGDELITLGPQGGLARGMASRGPPAASSFGGPNGYGNLSVRPSYSPREDLTPRYVPDRFSGQTTYDQSSVLEQNMNYGNRDLRNVDNRILDRPVVNPPPARAQETSDFQYTSSEKSLSEERLQNMAMAAIREYYSARDVNEVVLCVKDLNSPNFHPSMVSVWVTDSFERKDTERDLLAKLLIDLVKSHGGTLSQAQLIGGFESVLNTLEDGVTDAPKAPEFLGRIFAKAITEHVVSLEEIGRLIHNGGESLLQIGLAADVLGSTLEVIQTEKGDSFLTEIQRSSNLQLQTFRPPAPIKSRKLEKFI 1727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01010 1727 MobiDBLite consensus disorder prediction 406 429 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 543 608 - -
Trre14g01010 1727 Gene3D - 1534 1727 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 1193 1222 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 95 156 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 887 907 - -
Trre14g01010 1727 SMART ma3_7 1543 1657 IPR003891 -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 893 907 - -
Trre14g01010 1727 Pfam MA3 domain 1549 1655 IPR003891 -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 442 498 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 361 429 - -
Trre14g01010 1727 FunFam Eukaryotic translation initiation factor 4G 1101 1336 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 1326 1347 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 1326 1362 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 749 825 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 17 34 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 383 405 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 749 771 - -
Trre14g01010 1727 SMART if4_15 1101 1323 IPR003890 GO:0003723|GO:0005515
Trre14g01010 1727 FunFam Eukaryotic translation initiation factor 4G 1536 1726 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 219 233 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 42 67 - -
Trre14g01010 1727 Coils Coil 1183 1203 - -
Trre14g01010 1727 Pfam MIF4G domain 1101 1322 IPR003890 GO:0003723|GO:0005515
Trre14g01010 1727 MobiDBLite consensus disorder prediction 683 737 - -
Trre14g01010 1727 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 357 1727 IPR045208 GO:0003743
Trre14g01010 1727 MobiDBLite consensus disorder prediction 180 258 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 952 971 - -
Trre14g01010 1727 ProSiteProfiles MI domain profile. 1542 1666 IPR003891 -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 543 631 - -
Trre14g01010 1727 Gene3D - 1101 1336 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 1 80 - -
Trre14g01010 1727 SUPERFAMILY ARM repeat 1536 1722 IPR016024 -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 1436 1455 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 442 505 - -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 683 711 - -
Trre14g01010 1727 SUPERFAMILY ARM repeat 1095 1325 IPR016024 -
Trre14g01010 1727 MobiDBLite consensus disorder prediction 95 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01010 Trre-Chr14 8545418 8553438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01010 1 1726 Eukaryotic Initiation Factors Gene Family AT3G60240 46.226 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01010 K03260 - gmx:100790680 2072.36