Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g01004 ATGTTTCATGACATGGATGGTGTACAATTTGGTGTGAAGATTGGAAGAGACAATCCAAGAATTTTCAGCTATGCAGAACTTTTCATAGGTTCTAATGGTTTCAATGAAGAACAAGTTCTAGGAAGTGGAGGTTTTGGAAAAGTTTACAAAGCTCTTTTGCCAAGTGATGGAACTTTAGTAGCTGTGAAATGTTGTTTATCAGAAAAAGGTAAACAATTTGACAAAAGTTTCTTAGCCGAATTATCGGCTGTAGCCGATCTTCGACATAAGAATCTTGTTAGGTTAAGAGGTTGGTGTGTACATGAAGATCAATTACATCTTGTTTATGATTACATGCCGAATCGAAGCCTTGACCGTGTACTCTTCCGAAGGGCGCCGGAGAATTTGAAAGGTGAGCAGCCTCTTGGTTGGAGACAAAGAGAAAAAATTGTTAAAGGAAGAAGAGCAATAGATTTAGCATATTCTGATGATAAAATCATTTTGCTTGATTGGATTAGAAGGCTTTGTGATGAAGGAAAGGTTATAGAAGCAGCTGATATAAGGTTTCAAAAAGATGGATCATATAATTTTTCTGAGATGAAGCATTTCATTCATATAGGTCTTCTTTGTACACTTCATGATCCAAATTTAAGGCCTAATATGAAATGGATTGTGGAAGCACTTTCTGATTTAAGTTTTAAACTTCCTTCACTTCCTTCATTTCTATCACATCCTCTATATATCTCTTTGTCTTCACCAAGTGAAACTACTAGTCCTAGTAGTACTAGTGGCACAATTTCAGCCTCGGAAAATGTTAGCTTGATCACAAACTATAGTTCATCAAACTATGTTACAGCTGCAGGTGAAACAGTTTATGTAACTGCTGACAACAAAAATAGTGGAATCAATTCTTCTAATAGGCCTCATCATCATCACAACAGGCAACGGTTTCCGGTGGTTGAAACTCCGAGAGAAATTTCATACAAAGAGATTGTTTGTGCTACAAATAACTTCTCAGAGTCAAGAAGGGTAGCTGAACTTGACTTTGGAACTGCTTATCATGGAGTTCTTGATGACAATTGCCATGTTTTGGTGAAAAGATTGGGAATGAAGACGTGTCCTGCATTGCGCGATAGATTCTCGAATGAACTCAGAAATCTAGGAAAGCTTCGGCATAGGAATTTGGTTCAGCTTCGCGGATGGTGTACCGAACAAGGGGAGATGCTCGTGGTTTATGATTACTCGGCTAGTAGAATTCTCAGTCAACAGCTTCTTCAAATTCATAACAAAGGTACGAATGGATATCGATGTTCGGTACTCGAATGGCATCATAGGTACACCATAGTGAAATCACTTGCTTCTGCTGTTCTTTATCTACATGAAGAATGGGATGAACAAGTGATTCACAGAAACATTACCTCATCAGCTGTTATTCTTGAACAAGATATGAATCCAAGACTTAGTAGTTTTGCTCTAGCTGAATTCTTGTCAAGAAATGAGCATGGCCATCATGTAGCAAATGATACTAACAAATCAGTTCGAGGGATTTTCGGTTACATGTCACCGGAATACGTTGAAACCGGCGAAGCAACCTCGGCTGCTGATGTTTATAGTTTCGGCGTGGTGGTACTTGAAGTTGTTAGTGGACAAATGGCTGTGGATTTTAGGTACCAAGAAGTTCTTCTGGTGAAAAAAGTTCATGAGTTTGTGGTGAGAAAAAGACCATTGAAGGAATTAGCAGATATAAGACTAAATGGAGAGTATAATGAGGAAGAATTGATGAGGTTGTTAAGATTAGGAATTGCATGCACTAGTGGTGATCCTAAGTTGAGACCAAGTATGAGACAAATTGTGAGCATTCTTGATGGAAATGATAAATTACTACTTAACTTGATAAAGAAGGAAAGTAGGGAAGAATGGAGAGAAAGAAATTCTAGTTCTTTGTCTATGATTAGGAGAATTCAAGCTTTAGGAATACAGTAA 1962 0.3782 MFHDMDGVQFGVKIGRDNPRIFSYAELFIGSNGFNEEQVLGSGGFGKVYKALLPSDGTLVAVKCCLSEKGKQFDKSFLAELSAVADLRHKNLVRLRGWCVHEDQLHLVYDYMPNRSLDRVLFRRAPENLKGEQPLGWRQREKIVKGRRAIDLAYSDDKIILLDWIRRLCDEGKVIEAADIRFQKDGSYNFSEMKHFIHIGLLCTLHDPNLRPNMKWIVEALSDLSFKLPSLPSFLSHPLYISLSSPSETTSPSSTSGTISASENVSLITNYSSSNYVTAAGETVYVTADNKNSGINSSNRPHHHHNRQRFPVVETPREISYKEIVCATNNFSESRRVAELDFGTAYHGVLDDNCHVLVKRLGMKTCPALRDRFSNELRNLGKLRHRNLVQLRGWCTEQGEMLVVYDYSASRILSQQLLQIHNKGTNGYRCSVLEWHHRYTIVKSLASAVLYLHEEWDEQVIHRNITSSAVILEQDMNPRLSSFALAEFLSRNEHGHHVANDTNKSVRGIFGYMSPEYVETGEATSAADVYSFGVVVLEVVSGQMAVDFRYQEVLLVKKVHEFVVRKRPLKELADIRLNGEYNEEELMRLLRLGIACTSGDPKLRPSMRQIVSILDGNDKLLLNLIKKESREEWRERNSSSLSMIRRIQALGIQ 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g01004 653 CDD STKc_IRAK 342 616 - -
Trre14g01004 653 FunFam Receptor like protein kinase S.2 409 638 - -
Trre14g01004 653 SUPERFAMILY Protein kinase-like (PK-like) 19 144 IPR011009 -
Trre14g01004 653 Gene3D Phosphorylase Kinase; domain 1 291 407 - -
Trre14g01004 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 143 262 - -
Trre14g01004 653 Gene3D Transferase(Phosphotransferase) domain 1 141 227 - -
Trre14g01004 653 Gene3D Phosphorylase Kinase; domain 1 8 111 - -
Trre14g01004 653 FunFam Receptor like protein kinase S.2 289 407 - -
Trre14g01004 653 SUPERFAMILY Protein kinase-like (PK-like) 307 614 IPR011009 -
Trre14g01004 653 ProSiteProfiles Protein kinase domain profile. 331 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01004 653 Pfam Protein tyrosine and serine/threonine kinase 336 614 IPR001245 GO:0004672|GO:0006468
Trre14g01004 653 Pfam Protein kinase domain 34 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g01004 653 Gene3D Transferase(Phosphotransferase) domain 1 415 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g01004 Trre-Chr14 8497261 8499570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g01004 316 615 Receptor kinase-like Gene Family AT5G65600 38.585 1.58e-60 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre14g01004 PK_Tyr_Ser-Thr 2.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g01004 - - vun:114184452 746.117