Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00991 ATGTCAAAGCACGAATTGTTACCCACAATGGGCCTAAAGCCCAAACCATTCAAAAACAGTGATGAAGCCAAGGAACCACATTTAAAATGCTGTCATAATAATGCAACTTATAGTAACAAGAACAACAAAGAGAACAGGAAGAAAAAAGACAACGAGGAAAGCACATCATCATCGAAACATATAGTTTTTGATGAAGATGTTTCCAAGGGAATTGAGACTGTTCCAATATCTATGGTAAATAATGTGGATTACGAAAAAGTTCCAGTTTTTCGTTACATTAAACGCATGATTTATCCAAACTGGTGTAATCCCGTTAAAGGTCCCTATGTGGGGTGCAATTGTGCTGGTGAGTGTTCTGATTCTGTAAAATGTTTTTGTGCTTTAAAGAATGAAGGGAAAATTCCTTTTGATAAGAATAAAACTATTATGACAACAGAACAAGATATAATTTATGAGTGTGGTCCTTATTGTAAGTGTTCCTCAAGTTGTCGCAATAGAGTCAGTCAATATGGCATTAAATTTAAGCTTCAGATTTTCAAGACGAAGAAAAAAGGTTGGGGTGTCAGATCACATAATAGAATTCCTGCTGGAAGTTTTGTTTGTGAATATTTGGGTGAAATTATTGACGACGAACAAGCTGTGAAAATGATTGACAACGATCAATATTTATTCAATCTTGGTAATGATCTCAATGGCGATGTTTATGGCAACTATACCATTAATGCTGATCACTATGGTAATGTGGCAAGATTTATCAACCATAGTTGTTCTCCGAATTTATTTTGTCAGAGAGTTCTTTATGATCATGATGATGGTAGGATACCCCACATGATGCTATTTGCAGCTATTGACATTCCAAAAATGCAAGAACTGACTTTGGATTACCATTACGAAATTGATCAAGTGATTGATTCAAACGGAAAGGTAAAGAAGAAGAAATGCTATTGTGGTGCTTTGGAATGTTGTGGCAGGTTGTATTAA 981 0.3517 MSKHELLPTMGLKPKPFKNSDEAKEPHLKCCHNNATYSNKNNKENRKKKDNEESTSSSKHIVFDEDVSKGIETVPISMVNNVDYEKVPVFRYIKRMIYPNWCNPVKGPYVGCNCAGECSDSVKCFCALKNEGKIPFDKNKTIMTTEQDIIYECGPYCKCSSSCRNRVSQYGIKFKLQIFKTKKKGWGVRSHNRIPAGSFVCEYLGEIIDDEQAVKMIDNDQYLFNLGNDLNGDVYGNYTINADHYGNVARFINHSCSPNLFCQRVLYDHDDGRIPHMMLFAAIDIPKMQELTLDYHYEIDQVIDSNGKVKKKKCYCGALECCGRLY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00991 326 MobiDBLite consensus disorder prediction 1 59 - -
Trre14g00991 326 MobiDBLite consensus disorder prediction 41 59 - -
Trre14g00991 326 SMART preset_2 64 158 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Trre14g00991 326 Pfam Pre-SET motif 68 166 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Trre14g00991 326 SUPERFAMILY SET domain 57 302 IPR046341 -
Trre14g00991 326 ProSiteProfiles Pre-SET domain profile. 110 171 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Trre14g00991 326 Pfam SET domain 185 295 IPR001214 GO:0005515
Trre14g00991 326 ProSiteProfiles Post-SET domain profile. 310 326 IPR003616 -
Trre14g00991 326 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESS 52 228 - -
Trre14g00991 326 Gene3D SET domain 54 326 IPR046341 -
Trre14g00991 326 SMART set_7 174 302 IPR001214 GO:0005515
Trre14g00991 326 ProSiteProfiles SET domain profile. 174 296 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00991 Trre-Chr14 8408957 8409937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00991 54 326 EF-hand Containing Proteins AT5G13960 43.092 1.37e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre14g00991 SET 5.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00991 K11420 - cam:101497063 339.347