Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00982 ATGCACCATGACTGCTCCCCTCCGATTGTTCATCGAGATATATCAAGCAAGAACATTCTTCTGGATTTAGAATATGTGGCTCATGTCTCCGACTTTGGAACAGCTAAGCTTCTTAATCCTAATTCTTCCAATTGGACCTCTTTTGCAGGCACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTGAATGAGAAAAATGATGTGTATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAACACCCTGGAGATATTCTATCTAACTCTTTACAATGGATTATCATGGGATCAACACTTGATACAATGCCATTGATGAATAAGTTGGATCAACGGCTCTCTCGTCCGGCGAATCGTCGACAAGCTAAGGAGTTAGTATCTATTGCAAAGACAACAATTTCTTGTTTGGCTGATAGTCCACAATGTCGCCCTACCATGGAGCAGGTTTCTAGGGAGCTTTTAAGTGTGTAG 483 0.4079 MHHDCSPPIVHRDISSKNILLDLEYVAHVSDFGTAKLLNPNSSNWTSFAGTFGYAAPELAYTMEVNEKNDVYSFGVLALEILFGKHPGDILSNSLQWIIMGSTLDTMPLMNKLDQRLSRPANRRQAKELVSIAKTTISCLADSPQCRPTMEQVSRELLSV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00982 160 PANTHER LEUCINE RICH REPEAT KINASE 2 1 159 - -
Trre14g00982 160 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Trre14g00982 160 Pfam Protein kinase domain 5 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00982 160 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00982 160 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00982 160 Gene3D Transferase(Phosphotransferase) domain 1 1 160 - -
Trre14g00982 160 SUPERFAMILY Protein kinase-like (PK-like) 1 157 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00982 Trre-Chr14 8383944 8384696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00982 1 158 Receptor kinase-like Gene Family AT5G49660 41.818 9.67e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00982 Pkinase 1.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00982 - - tpra:123888271 308.145