Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00971 ATGGTGTTCCTATTTTCAAATCTTCAGTACAAGAAGTTGTTGCACTTTTATTTGCTTCTATCAACTTGTTTTGGTGCACTCACAACAGCCACTTTACAAAGTAGAGAAGAAGCAAGTGCTTTGTTGAAATGGAAAGCAAGTCTTGATAATCAAAGCCAAACCTTACTATCTTCATGGAGTGGCAATAATTCATGCAACAACTGGCTTGAAATTACTTGTGATGAAGATTCCATATCAGTGTCTAATGTAAGTCTCACAAATATGGGATTGAAAGGTACACTCAAAAGTTTTAACTTCACATCACTTCCAAATATTCTTACTCTTGATCTTAGTTTCAACTTCTTGAATGAAAATATTCCTAACAATATTGGAATGTTGTCCAAACTTTCTTATCTTGATATTAGTGACAATCTTCTCTCAGGAACAATTCCATATGAAATAACAAATTTGACTAGTCTTCACACTTTATATCTAGATGATAATTTTTTTAGTAGTTCAATTCCTGAAAAAATAGGTGCATTGAGGAATATGAGAATACTTAGTATCCCAAATGCAAATCTTATAGGAACTCTCCCAACTTCTATTTGGAATCTGACCTTGTTGTCAGAGTTGTACCTAGAACACAACAAACTTTCTGGAGAAATCCCACCTACAATTGGAAAATTACTGAACATAGAAATTCTATTTCTTTATGAAAATAATCTTTCTGGATCTATTCCTCAAGAAATTGGGAAATTAACAAACATAACATATCTAAATCTTCATGACAATATGCTTTCTGGATCTATTCCGCGCGAAATTGGAAAGTTATTGAAATTAGAAATTCTATATCTTCAAGTCAATAATCTTTCTGGATCCATTCCTCAAGAATTTGGAAAGTTAGTGAACATAACAGATTTATACCTTAAAGATAATATTCTTTCGGGTTTCATTCCTAGCGAAATCGGAATGATGAGATCTTTGTGGCAAATTGAGTTTTCAAATAATGCTTTCTTTGGTAAAATACCATCTTCAATTGGAAACTTGAGCCATTTATCTTATCTTGGCATTCATAGAAACCATTTGGGTGGGGAAATTCCAACAGAATTGAATATGCTTGCTAATTTGAGTTCACTCTTTCTACATGATAACAATTTCATTGGTGAGTTGCCTCATAACATTTGCTTTAGTGGAAACTTGAAATCTATTATTGCTTCAAATAACCATTTTACTGGTCAAGTTCTAAAGAGTCTGAAGAATTGTTCTAGTCTTACTAGACTTTGGCTTAAACATAACCAATTTTATGGAAACATAACAGATGATTTAGGTGTATACCCAAATTTGAAGTTCATGGAATTGGATGACAATAATTTCTATGGCCACCTTTCATCCAACTGGGGAAAGTTTCATAACTTGACACAACTTCACATCTCCAAAACTAATATATCAGGTTGTATACCACCCGAACTCGGTGAAGCACCTAGCCTATATTCAATTGACTTATCTTCAAACAATCTTACAGGAAAAATTCCAAAGGAGTTAAGCAACTTGACTTTGTTGTCAATTCTAATGATAAGCAACAACCATCTTTCAGGAAACATTCCTGTGCAAATAGCATCCTTAGATGAACTTGATACCTTAGACTTTGCAGGAAATAATCTAAGTGGCTTCATCACAAAAGAACTTGCAATTCTGTCCAAGTTATGGAACTTAAATTTGAGCCAAAACAAATTCATAGGAAATATTCCTGTTGAATTTGGACGATTCAAAGTCCTTCGAAGTCTTGATCTTAGTGGAAATTTCTTGGATGGAACAATACCAGCAATGCTTACCCAGTTGAAATACTTGGAAACATTGAATCTTGCACATAATAACCTTTCTGGCGTTATTCCTTCCGACTTTGATCAGATGTTGAGCTTGACGATTGTTGATATATCATATAATCAGTTGGAGGGTCCACTCCCCAACATTCGAGCCTTCAATAACGCTACAATTGAAGTGTTGAGAAATAACAAAGGCTTGTGTGGTAATATTAATGGCTTAGAGTCCTGTCCAATATCAAGAAGTGAATCTCACCATCATTCTCATCATCATATTAAAAAAGTCTTGTTAATAGTTTTACCCCTTATAATTGTTGGAACCATAATGCTAGCATTAATTTGCTATAAATTCTCATATCATCTCTTCCAAACATCAACCACGGAGGAAAATCAGGTTGGAGGGAACAATAATGTACTTCAAGATGTATTTACAATATGGAACTTTGATGGAAAAATTGTGTATGAGAACATTATGGAAGCCACAGAAGAGTTTGATGACAAATATCTCACTGGAGTTGGAGGGCATGGAAGTGTATACAAAGCTAAGTTGCAGACAGGTCAAGTAGTTGCTGTGAAAAAGCTTCATTCAGTAGCAAATGGGGAAAATCTCAATCTAAAATCATTCACGAATGAGATCCAAGCTTTGACTGAAATTCGACATCCTAAGCTTCTAAATCTTAATTTAACCGACTCAACGTCATTTGCATGCACATTTGGATATGCTGCTCCAGAACTTGCATACACGACGAGAGTGAATGAGAAATGTGATGTGTATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAACATCCTGGAGATGTTGTATCTTTATGGACCGCCGTTGGCTCTATACCTGATCCGATGCTACTAATGGATAAGTTGGACCAACGTCCTCCTCATCCTTTGAATCCCATTATCGAGGAGTTAGTAACGATTGCAGTGATAGCTTTAGCATGTTTGACTGAAAGTCATCAATCTCGCCCTACCATGAAGCAGGTTTTGAAGGAGTTGGCAGGTTTTTAA 2829 0.3499 MVFLFSNLQYKKLLHFYLLLSTCFGALTTATLQSREEASALLKWKASLDNQSQTLLSSWSGNNSCNNWLEITCDEDSISVSNVSLTNMGLKGTLKSFNFTSLPNILTLDLSFNFLNENIPNNIGMLSKLSYLDISDNLLSGTIPYEITNLTSLHTLYLDDNFFSSSIPEKIGALRNMRILSIPNANLIGTLPTSIWNLTLLSELYLEHNKLSGEIPPTIGKLLNIEILFLYENNLSGSIPQEIGKLTNITYLNLHDNMLSGSIPREIGKLLKLEILYLQVNNLSGSIPQEFGKLVNITDLYLKDNILSGFIPSEIGMMRSLWQIEFSNNAFFGKIPSSIGNLSHLSYLGIHRNHLGGEIPTELNMLANLSSLFLHDNNFIGELPHNICFSGNLKSIIASNNHFTGQVLKSLKNCSSLTRLWLKHNQFYGNITDDLGVYPNLKFMELDDNNFYGHLSSNWGKFHNLTQLHISKTNISGCIPPELGEAPSLYSIDLSSNNLTGKIPKELSNLTLLSILMISNNHLSGNIPVQIASLDELDTLDFAGNNLSGFITKELAILSKLWNLNLSQNKFIGNIPVEFGRFKVLRSLDLSGNFLDGTIPAMLTQLKYLETLNLAHNNLSGVIPSDFDQMLSLTIVDISYNQLEGPLPNIRAFNNATIEVLRNNKGLCGNINGLESCPISRSESHHHSHHHIKKVLLIVLPLIIVGTIMLALICYKFSYHLFQTSTTEENQVGGNNNVLQDVFTIWNFDGKIVYENIMEATEEFDDKYLTGVGGHGSVYKAKLQTGQVVAVKKLHSVANGENLNLKSFTNEIQALTEIRHPKLLNLNLTDSTSFACTFGYAAPELAYTTRVNEKCDVYSFGVLALEILFGKHPGDVVSLWTAVGSIPDPMLLMDKLDQRPPHPLNPIIEELVTIAVIALACLTESHQSRPTMKQVLKELAGF 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00971 942 Gene3D Ribonuclease Inhibitor 291 364 IPR032675 -
Trre14g00971 942 SMART LRR_typ_2 150 174 IPR003591 -
Trre14g00971 942 SMART LRR_typ_2 606 629 IPR003591 -
Trre14g00971 942 SMART LRR_typ_2 366 390 IPR003591 -
Trre14g00971 942 SMART LRR_typ_2 198 222 IPR003591 -
Trre14g00971 942 SMART LRR_typ_2 246 270 IPR003591 -
Trre14g00971 942 SMART LRR_typ_2 510 534 IPR003591 -
Trre14g00971 942 SMART LRR_typ_2 102 126 IPR003591 -
Trre14g00971 942 Gene3D Ribonuclease Inhibitor 184 290 IPR032675 -
Trre14g00971 942 SUPERFAMILY RNI-like 325 661 - -
Trre14g00971 942 Gene3D Phosphorylase Kinase; domain 1 725 824 - -
Trre14g00971 942 Pfam Protein tyrosine and serine/threonine kinase 835 939 IPR001245 GO:0004672|GO:0006468
Trre14g00971 942 FunFam Nuclear pore complex protein NUP107 34 193 - -
Trre14g00971 942 SUPERFAMILY Protein kinase-like (PK-like) 744 938 IPR011009 -
Trre14g00971 942 Gene3D Ribonuclease Inhibitor 33 183 IPR032675 -
Trre14g00971 942 ProSiteProfiles Protein kinase domain profile. 764 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00971 942 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 237 337 - -
Trre14g00971 942 Gene3D Ribonuclease Inhibitor 365 679 IPR032675 -
Trre14g00971 942 Pfam Leucine rich repeat 585 643 IPR001611 GO:0005515
Trre14g00971 942 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 366 681 - -
Trre14g00971 942 FunFam Leucine-rich repeat receptor protein kinase MSP1 726 832 - -
Trre14g00971 942 Gene3D Transferase(Phosphotransferase) domain 1 825 942 - -
Trre14g00971 942 PANTHER LEUCINE RICH REPEAT KINASE 2 316 826 - -
Trre14g00971 942 SUPERFAMILY L domain-like 59 381 - -
Trre14g00971 942 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00971 Trre-Chr14 8257489 8260726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00971 13 826 Receptor kinase-like Gene Family AT4G08850 41.818 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00971 PK_Tyr_Ser-Thr 8.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00971 - - tpra:123888271 1074.69