Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00970 ATGGTGTTCCTATTTTCAAATCTTCAGTACAAGAAGTTGTTGCACTTTTATTTGCTTCTATCAACTTGTTTTGGTGCACTCACAACAGCCACTTTACAAAGTAGAGAAGAAGCAAGTGCTTTGTTGAAATGGAAAGCAAGTCTTGATAATCAAAGCCAAACCTTACTATCTTCATGGAGTGGCAATAATTCATGCAACAACTGGCTTGAAATTACTTGTGATGAAGATTCCATATCAGTGTCTAATGTAAGTCTCACAAATATGGGATTGAAAGGTACACTCAAAAGTTTTAACTTCACATCACTTCCAAATATTCTTACTCTTGATCTTAGTTTCAACTTCTTGAATGAAAATATTCCTAACAATATTGGAATGTTGTCCAAACTTTCTTATCTTGATATTAGTGACAATCTTCTCTCAGGAACAATTCCATATGAAATAACAAATTTGACTAGTCTTCACACTTTATATCTAGATGATAATTTTTTTAGTAGTTCAATTCCTGAAAAAATAGGTGCATTGAGGAATATGAGAATACTTAGTATCCCAAATGCAAATCTTATAGGAACTCTCCCAACTTCTATTTGGAATCTGACCTTGTTGTCAGAGTTGTACCTAGAACACAACAAACTTTCTGGAGAAATCCCACCTACAATTGGAAAATTACTGAACATAGAAATTCTATTTCTTTATGAAAATAATCTTTCTGGATCTATTCCTCAAGAAATTGGGAAATTAACAAACATAACATATCTAAATCTTCATGACAATATGCTTTCTGGATCTATTCCGCGCGAAATTGGAAAGTTATTGAAATTAGAAATTCTATATCTTCAAGTCAATAATCTTTCTGGATCCATTCCTCAAGAATTTGGAAAGTTAGTGAACATAACAGATTTATACCTTAAAGATAATATTCTTTCGGGTTTCATTCCTAGCGAAATCGGAATGATGAGATCTTTGTGGCAAATTGAGTTTTCAAATAATGCTTTCTTTGGTAAAATACCATCTTCAATTGGAAACTTGAGCCATTTATCTTATCTTGGCATTCATAGAAACCATTTGGGTGGGGAAATTCCAACAGAATTGAATATGCTTGCTAATTTGAGTTCACTCTTTCTACATGATAACAATTTCATTGGTGAGTTGCCTCATAACATTTGCTTTAGTGGAAACTTGAAATCTATTATTGCTTCAAATAACCATTTTACTGGTCAAGTTCTAAAGAGTCTGAAGAATTGTTCTAGTCTTACTAGACTTTGGCTTAAACATAACCAATTTTATGGAAACATAACAGATGATTTAGGTGTATACCCAAATTTGAAGTTCATGGAATTGGATGACAATAATTTCTATGGCCACCTTTCATCCAACTGGGGAAAGTTTCATAACTTGACACAACTTCACATCTCCAAAACTAATATATCAGGTTGTATACCACCCGAACTCGGTGAAGCACCTAGCCTATATTCAATTGACTTATCTTCAAACAATCTTACAGGAAAAATTCCAAAGGAGTTAAGCAACTTGACTTTGTTGTCAATTCTAATGATAAGCAACAACCATCTTTCAGGAAACATTCCTGTGCAAATAGCATCCTTAGATGAACTTGATACCTTAGACTTTGCAGGAAATAATCTAAGTGGCTTCATCACAAAAGAACTTGCAATTCTGTCCAAGTTATGGAACTTAAATTTGAGCCAAAACAAATTCATAGGAAATATTCCTGTTGAATTTGGACGATTCAAAGTCCTTCGAAGTCTTGATCTTAGTGGAAATTTCTTGGATGGAACAATACCAGCAATGCTTACCCAGTTGAAATACTTGGAAACATTGAATCTTGCACATAATAACCTTTCTGGCGTTATTCCTTCCGACTTTGATCAGATGTTGAGCTTGACGATTGTTGATATATCATATAATCAGTTGGAGGGTCCACTCCCCAACATTCGAGCCTTCAATAACGCTACAATTGAAGTGTTGAGAAATAACAAAGGCTTGTGTGGTAATATTAATGGCTTAGAGTCCTGTCCAATATCAAGAAGTGAATCTCACCATCATTCTCATCATCATATTAAAAAAGTCTTGTTAATAGTTTTACCCCTTATAATTGTTGGAACCATAATGCTAGCATTAATTTGCTATAAATTCTCATATCATCTCTTCCAAACATCAACCACGGAGGAAAATCAGGTTGGAGGGAACAATAATGTACTTCAAGATGTATTTACAATATGGAACTTTGATGGAAAAATTGTGTATGAGAACATTATGGAAGCCACAGAAGAGTTTGATGACAAATATCTCACTGGAGTTGGAGGGCATGGAAGTGTATACAAAGCTAAGTTGCAGACAGGTCAAGTAGTTGCTGTGAAAAAGCTTCATTCAGTAGCAAATGGGGAAAATCTCAATCTAAAATCATTCACGAATGAGATCCAAGCTTTGACTGAAATTCGACATCGTAATGTTGTGAAACTTTATGGATTTTGCTCACATTCACAATTGTCATTTTTGGTTTATGAGTTCATAGAGAAAGCTAAGCTTCTAAATCTTAATTTAACCGACTCAACGTCATTTGCATGCACATTTGGATATGCTGCTCCAGAACTTGCATACACGACGAGAGTGAATGAGAAATGTGATGTGTATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAACATCCTGGAGATGTTGTATCTTTATGGACCGCCGTTGGCTCTATACCTGATCCGATGCTACTAATGGATAAGTTGGACCAACGTCCTCCTCATCCTTTGAATCCCATTATCGAGGAGTTAGTAACGATTGCAGTGATAGCTTTAGCATGTTTGACTGAAAGTCATCAATCTCGCCCTACCATGAAGCAGGTTTTGAAGGAGTTGGCAGGTTTTTAA 2904 0.3488 MVFLFSNLQYKKLLHFYLLLSTCFGALTTATLQSREEASALLKWKASLDNQSQTLLSSWSGNNSCNNWLEITCDEDSISVSNVSLTNMGLKGTLKSFNFTSLPNILTLDLSFNFLNENIPNNIGMLSKLSYLDISDNLLSGTIPYEITNLTSLHTLYLDDNFFSSSIPEKIGALRNMRILSIPNANLIGTLPTSIWNLTLLSELYLEHNKLSGEIPPTIGKLLNIEILFLYENNLSGSIPQEIGKLTNITYLNLHDNMLSGSIPREIGKLLKLEILYLQVNNLSGSIPQEFGKLVNITDLYLKDNILSGFIPSEIGMMRSLWQIEFSNNAFFGKIPSSIGNLSHLSYLGIHRNHLGGEIPTELNMLANLSSLFLHDNNFIGELPHNICFSGNLKSIIASNNHFTGQVLKSLKNCSSLTRLWLKHNQFYGNITDDLGVYPNLKFMELDDNNFYGHLSSNWGKFHNLTQLHISKTNISGCIPPELGEAPSLYSIDLSSNNLTGKIPKELSNLTLLSILMISNNHLSGNIPVQIASLDELDTLDFAGNNLSGFITKELAILSKLWNLNLSQNKFIGNIPVEFGRFKVLRSLDLSGNFLDGTIPAMLTQLKYLETLNLAHNNLSGVIPSDFDQMLSLTIVDISYNQLEGPLPNIRAFNNATIEVLRNNKGLCGNINGLESCPISRSESHHHSHHHIKKVLLIVLPLIIVGTIMLALICYKFSYHLFQTSTTEENQVGGNNNVLQDVFTIWNFDGKIVYENIMEATEEFDDKYLTGVGGHGSVYKAKLQTGQVVAVKKLHSVANGENLNLKSFTNEIQALTEIRHRNVVKLYGFCSHSQLSFLVYEFIEKAKLLNLNLTDSTSFACTFGYAAPELAYTTRVNEKCDVYSFGVLALEILFGKHPGDVVSLWTAVGSIPDPMLLMDKLDQRPPHPLNPIIEELVTIAVIALACLTESHQSRPTMKQVLKELAGF 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00970 967 Gene3D Ribonuclease Inhibitor 184 290 IPR032675 -
Trre14g00970 967 Gene3D Ribonuclease Inhibitor 291 363 IPR032675 -
Trre14g00970 967 FunFam Leucine-rich repeat receptor protein kinase MSP1 726 842 - -
Trre14g00970 967 Pfam Protein tyrosine and serine/threonine kinase 859 964 IPR001245 GO:0004672|GO:0006468
Trre14g00970 967 Gene3D Ribonuclease Inhibitor 364 679 IPR032675 -
Trre14g00970 967 Gene3D Phosphorylase Kinase; domain 1 725 842 - -
Trre14g00970 967 Pfam Leucine rich repeat 585 643 IPR001611 GO:0005515
Trre14g00970 967 SUPERFAMILY Protein kinase-like (PK-like) 751 962 IPR011009 -
Trre14g00970 967 PANTHER LEUCINE RICH REPEAT KINASE 2 324 845 - -
Trre14g00970 967 FunFam Nuclear pore complex protein NUP107 34 193 - -
Trre14g00970 967 SMART LRR_typ_2 150 174 IPR003591 -
Trre14g00970 967 SMART LRR_typ_2 606 629 IPR003591 -
Trre14g00970 967 SMART LRR_typ_2 366 390 IPR003591 -
Trre14g00970 967 SMART LRR_typ_2 198 222 IPR003591 -
Trre14g00970 967 SMART LRR_typ_2 510 534 IPR003591 -
Trre14g00970 967 SMART LRR_typ_2 246 270 IPR003591 -
Trre14g00970 967 SMART LRR_typ_2 102 126 IPR003591 -
Trre14g00970 967 Pfam Protein kinase domain 770 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00970 967 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 237 337 - -
Trre14g00970 967 Gene3D Transferase(Phosphotransferase) domain 1 845 967 - -
Trre14g00970 967 SUPERFAMILY RNI-like 325 661 - -
Trre14g00970 967 ProSiteProfiles Protein kinase domain profile. 764 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00970 967 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 366 681 - -
Trre14g00970 967 SUPERFAMILY L domain-like 35 329 - -
Trre14g00970 967 Gene3D Ribonuclease Inhibitor 33 183 IPR032675 -
Trre14g00970 967 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00970 Trre-Chr14 8257489 8260726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00970 13 848 Receptor kinase-like Gene Family AT4G08850 42.739 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00970 PK_Tyr_Ser-Thr 8.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00970 - - tpra:123888271 1122.84