Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00969 ATGGTGTTCTTATTTTCAAACCTTCAGTCCATGAACTTGTTGCCCTTTTGGCTGCTTCTATCAACTTGTTTTTGTGCATTCACAACAGCCACTTTAGAAAGTAGAGAAGAAGCAAGTGCTTTGTTGAAGTGGAAAACAACTCTTGACAACCAAAGCCAAACCTTACTATCTTCATGGAGTGGCAATAATTCATGCAACTGGCTTGGAATTACTTGTGATGAAAATTTCATATCAGTGTCTAAGATAAATCTCACAAATATGGGATTAAAAGGTACACTCAAAAGTCTTAACTTCACATCACTTCCAAATATTCTTACTCTTAATCTTAGTTCCAACTTCTTGAATGGAAATATTCCTAACCATATTGGAATGTTGTCCAAACTTTCTCATCTTGATCTTAGTCACAATCTTCTCTTAGGAACAATTCCATATGAAATAACACAGTTGATTAGTCTTCATACTTTATATCTAGATAATAATATTTTCAGTAGTTCCATTCCTAAAGAAATAGGTGCATTGAGAAATTTGAGAGAACTTAGTATCTCAAGTGCAAATCTCACAGGAACTATTCCAACTTCTATTGGGAATCTGACCTTGTTGTCACATATGAATTTAGGAGGCAACAACCTTTATGGCAACATTCCAAAAGAACTTTGGAATTTGAGCAACTTAAACTACTTAACAGTTGAATTAAATAAGTTTAATGGTTTTGTTTTTGCTCAAGAAATTTTGAAGTTGCATAAGCTAGAGACTCTAGATCTTGGTGGCAATGGTCTTTCCATTGATGGTCTTATTCTCCAAGAAATTTGGAAGTTGGAAAATTTAACATACCTTTCTTTTCAACAATGCAATGTCAAAGGGTCTATTCCATTTTCTATAGGAAAGTTGGCCAAGTTATCATATCTAAATTTAGCACACAACCATATTTTTGGTCATATCCCTATAGAAATTGGGAAGTTGAGGAAGCTAGAATATTTATATTTTTTTGACAATAACTTATCTGGTAGCATTCCTGTGGAAATTGGGGGATTAGTGAACATTAAAGAGTTAAGGTTTAATGACAATAATCTTTCTGGTTCGATTCCTCGTGAAATCGGAATGATGAGAGCTGCGGTTCAAATTGATTTAAACAATAACTCTCTCTCAGGTAAAATCCCACCTACAATTGGAAACTTGAGTAATATGCAAGAACTTGCATTTGCTATAAACTATCTCAATGGAAAACTTCCAATGGAAATGAATATGCTTGTCAGTTTGGTTACCCTACAAATTTATGATAATGACTTCATTGGTCAGATGCCGCACAACATTTGTATTGGGGGAAACTTGAAATTTTTGTCTATTAGGAATAACCATTTCACTGGCCCAGTTCCAAAGAGTTTGAAGAATTGTACTAGCATTATAAGACTTAGGCTTGACCAAAATCAACTGAATGGAAATATAACAGAAGATTTTGGTATTTATCCAAATTTGAATTACATACATTTAGGTGAAAACAATTTTTATGGACACCTTTCTTCCAATTGGGGAAAGTGTCCTAACCTGACAAACCTCAACATTTCTAATAATAATATAACAGGTGATATACCAGTAGAAATAGGCGAGGCACGCAACTTGTATACTCTTGACTTATCTTCGAACCATCTCGAAGGAAAAATTCCAAGGGAGTTAAGCAACTTGACTTTGTTGACAAATCTACTGATAAGCAACAACCATCTTTCAGGAAACATTCCTGTGCAAATAGCATCCTTAGATGAACTTGATACCTTAGACTTTGCAGGAAATAATTTAAGTGGCTTCATCACAAAAGAACTTGCAATTTTGTCCAATTTATGGAACTTAAATTTGAGCCAAAACAAATTCATAGGAAATATTCCTGTTGAATTTGGACGATTTAAAGTCCTTCGAAGTCTTGATCTTAGTGGAAATGTTTTGGATGGAACAATACCACCAATGCTTACAGAATTGAAATACTTGGAAACATTGATACTTGCACATAATAACCTTTCTGGTCTTATTCCTTCCGGCTTTGATCAGATGTTGAGCTTGACGTTTGTTGATATATCATATAATCAGTTGGAGGGTCCACTCCCCAACATTCGAGCCTTCAATAACGCTACAATTGAATTGTTGAGAAATAACAAAGGTTTGTGTGGTAATGTTTATGGCTTAGAGTCCTGTCCATCATCAAAAAGTGAATCTCACCATCATTCTCATCATCATATTACCAAAGTGTTGTTAATAGTTTTACCCCTTGTTGGAACCGTAATGCTAGCATTAATTTGCTTGAAATTCTCATATAATTTCTTCCATACATCAACCACCGAAGAAAATGTTGGAGGGGATGTCATTTCAGCTCAAAATGTATTTACAATATGGAACTTTGATGGAAAAATTGTGTATGAGAACATTGTGGAAGCCACAGAAGAGTTTGATGACAAACATCTCATTGGATTTGGAGGGCATGGAAGTGTATACAAAGCTAAGTTGCAGACAGGTCAAGTAGTTGCTGTGAAAAAGCTACATTCAGTAGCAAATGGGGGAAATTCCAATCTAAAATCATTCACAAATGAGATCCAAGCTCTGACTGAAATTCGACATCGTAATGTTGTGAAACTGTATGGATTTTGCTCACATTCACAATTGTCATTTTTGGTTTATGAGTTCATAGAGAAAGGTAGTTTGGAAAAGATTTTGATAGATGATGAACAAGCAATTGCATTTGATTGGAATAAGAGGGTGAATGCCATTAAAGATGTAGCCAATGCTTTATGCTATATGCATCATGATTGCTCAGTTCCAATTGTTCATCGAGATATATCTAGCAAGAACATTCTTTTGGATTTGGAATGTGTGGCTCATGTCTCTGACTTTGGAACAGCTAAGCTTCTAAATCTTAATTTAACCAACTCAACGTCATTTGCATGCACCTTCGGATATGCTGCTCCAGAACTGGCATATACGACGAGAGTGAATGAGAAATGTGATGTGTATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAACATCCTGGAGATATTGTATCTTTATGGACCGTCGTTGGCTTTATACCTGATGCAATGCTACTAATGGATAAGTTGGACCAACGTCTTCCTCATCCTTTCAGTCCCATCATCGAGGAGTTAGTAACGATTGCAATGATAGCTTTTGTATGTTTGACTGAAAGTCCTCAATCACGCCCTACCATGAAGCAGGTTTCGCTAGAGTTATCAGGATTGTAA 3249 0.3536 MVFLFSNLQSMNLLPFWLLLSTCFCAFTTATLESREEASALLKWKTTLDNQSQTLLSSWSGNNSCNWLGITCDENFISVSKINLTNMGLKGTLKSLNFTSLPNILTLNLSSNFLNGNIPNHIGMLSKLSHLDLSHNLLLGTIPYEITQLISLHTLYLDNNIFSSSIPKEIGALRNLRELSISSANLTGTIPTSIGNLTLLSHMNLGGNNLYGNIPKELWNLSNLNYLTVELNKFNGFVFAQEILKLHKLETLDLGGNGLSIDGLILQEIWKLENLTYLSFQQCNVKGSIPFSIGKLAKLSYLNLAHNHIFGHIPIEIGKLRKLEYLYFFDNNLSGSIPVEIGGLVNIKELRFNDNNLSGSIPREIGMMRAAVQIDLNNNSLSGKIPPTIGNLSNMQELAFAINYLNGKLPMEMNMLVSLVTLQIYDNDFIGQMPHNICIGGNLKFLSIRNNHFTGPVPKSLKNCTSIIRLRLDQNQLNGNITEDFGIYPNLNYIHLGENNFYGHLSSNWGKCPNLTNLNISNNNITGDIPVEIGEARNLYTLDLSSNHLEGKIPRELSNLTLLTNLLISNNHLSGNIPVQIASLDELDTLDFAGNNLSGFITKELAILSNLWNLNLSQNKFIGNIPVEFGRFKVLRSLDLSGNVLDGTIPPMLTELKYLETLILAHNNLSGLIPSGFDQMLSLTFVDISYNQLEGPLPNIRAFNNATIELLRNNKGLCGNVYGLESCPSSKSESHHHSHHHITKVLLIVLPLVGTVMLALICLKFSYNFFHTSTTEENVGGDVISAQNVFTIWNFDGKIVYENIVEATEEFDDKHLIGFGGHGSVYKAKLQTGQVVAVKKLHSVANGGNSNLKSFTNEIQALTEIRHRNVVKLYGFCSHSQLSFLVYEFIEKGSLEKILIDDEQAIAFDWNKRVNAIKDVANALCYMHHDCSVPIVHRDISSKNILLDLECVAHVSDFGTAKLLNLNLTNSTSFACTFGYAAPELAYTTRVNEKCDVYSFGVLALEILFGKHPGDIVSLWTVVGFIPDAMLLMDKLDQRLPHPFSPIIEELVTIAMIAFVCLTESPQSRPTMKQVSLELSGL 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00969 1082 ProSiteProfiles Leucine-rich repeat profile. 538 561 IPR001611 GO:0005515
Trre14g00969 1082 Gene3D Ribonuclease Inhibitor 184 239 IPR032675 -
Trre14g00969 1082 FunFam Nuclear pore complex protein NUP107 34 192 - -
Trre14g00969 1082 ProSitePatterns Tyrosine protein kinases specific active-site signature. 935 947 IPR008266 GO:0004672|GO:0006468
Trre14g00969 1082 Gene3D Ribonuclease Inhibitor 415 736 IPR032675 -
Trre14g00969 1082 FunFam Uncharacterized protein 441 736 - -
Trre14g00969 1082 SMART LRR_typ_2 197 221 IPR003591 -
Trre14g00969 1082 SMART LRR_typ_2 656 679 IPR003591 -
Trre14g00969 1082 SMART LRR_typ_2 344 368 IPR003591 -
Trre14g00969 1082 SMART LRR_typ_2 125 148 IPR003591 -
Trre14g00969 1082 SMART LRR_typ_2 296 320 IPR003591 -
Trre14g00969 1082 SMART LRR_typ_2 149 173 IPR003591 -
Trre14g00969 1082 SMART LRR_typ_2 246 272 IPR003591 -
Trre14g00969 1082 SMART LRR_typ_2 608 632 IPR003591 -
Trre14g00969 1082 SUPERFAMILY Protein kinase-like (PK-like) 790 1076 IPR011009 -
Trre14g00969 1082 ProSiteProfiles Protein kinase domain profile. 811 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00969 1082 ProSiteProfiles Leucine-rich repeat profile. 514 536 IPR001611 GO:0005515
Trre14g00969 1082 Pfam Leucine Rich Repeat 442 464 IPR001611 GO:0005515
Trre14g00969 1082 SUPERFAMILY RNI-like 374 700 - -
Trre14g00969 1082 ProSitePatterns Protein kinases ATP-binding region signature. 817 840 IPR017441 GO:0005524
Trre14g00969 1082 Gene3D Transferase(Phosphotransferase) domain 1 890 1082 - -
Trre14g00969 1082 FunFam Leucine-rich repeat receptor protein kinase MSP1 774 889 - -
Trre14g00969 1082 FunFam MDIS1-interacting receptor like kinase 2 890 1081 - -
Trre14g00969 1082 Gene3D Phosphorylase Kinase; domain 1 776 889 - -
Trre14g00969 1082 Gene3D Ribonuclease Inhibitor 33 183 IPR032675 -
Trre14g00969 1082 Gene3D Ribonuclease Inhibitor 240 414 IPR032675 -
Trre14g00969 1082 Pfam Leucine rich repeat 635 693 IPR001611 GO:0005515
Trre14g00969 1082 Pfam Leucine rich repeat 513 573 IPR001611 GO:0005515
Trre14g00969 1082 Pfam Protein kinase domain 812 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00969 1082 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 320 1079 - -
Trre14g00969 1082 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Trre14g00969 1082 FunFam Receptor-like protein kinase 7 198 440 - -
Trre14g00969 1082 SUPERFAMILY L domain-like 63 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00969 Trre-Chr14 8252018 8255422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00969 25 983 Receptor kinase-like Gene Family AT4G08850 41.856 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00969 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00969 - - tpra:123888271 1233.78