Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00936 ATGAAGGCTATGCCCTTATCTTTTGAAGAATACATAGGAAAAGGGGTGTTAGATTTTGGTTCAAGTGTTGTTGTTGGTTCTTCAGATTCATTGTTTTTTCATCAGCAGCAAGAACAATTTCTACAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTCTTGTTTTTGACCACAAAAAACCAAATCAAGAAACCACTCCTACTTCATCCTCTACACTGTCTTCCTCACACGGTAGTGCTGCCGGAGCCGGAGCCACCGGCGGTTCAACCGATAGCACCACCGGTGGTGCCTCCGCTGCGGCAAATACCAAAAACAATATACTACAACAAAGTAAAGGAAGATGTGGAATGGAAGATTGGGAGAGTGTTTTGTCTGAATCACCAAGTCAAGATCAAGATCATTCAATATTGAAATTGATTATGGAAGATATTGAAGATGCTTCTATGGGATTAAGTAAGCTTTTACAAGTTGGAACAAGTAATTCTCATTCTCAACAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAACAAAGTTCTGTTCTTGATCCTATTTCTTCAAATGTTAACAACAATACAAACTTTGTAACTAGTATTGATTCTTCTTCTGTTGTTGCAACTACTACTACTACTATTGCTGCTGAGATTTGTTCTGATTTTCCTTTTGGTAGAGTTATGAATCAAAACCCTAATTTCAATTCTTCACAACAAGTTTCACTTTCTCAAGGTGGTTTGTTTCATCATCAGCAGCATCAACAGCAACAAATTCAGTCTCTTGATGAGAAGTTACCTCAATTTGTTATGAATCAAAACCAAGCTCAGTTTATGCCTAACCCTAGTTTGGTTTTTCCTTTCACATACTCTCAGCTGCAAGAAAATCAAGAGATTAATCATCAGCCACCAGCTAAAAGACTCAATTGTGGAACTAATTATGAAATTCCAAAGATACCCTTTTTGGATTCTGGTCAAGAGATGTTTCTTAGGAGGCAACAACAGCAGCAACAGCAACATCAGCAGCAGCTTCAACTGCTTCCACATCATCTGCAGCAGAGGCCAATGGCACCTAAGCAGAAAATGGGGAATCCTGGAAGTGGTGGCGGCGAAGATGTGTCGACTCATCAGTTTCAGCAGGCTATAATTGATCAGCTTTACAAAGCTGCAGAACTTATAGACGCCGGTAATCCGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCTATTGGGAAGCCTTTTCAAAGAGCTGCTTTCTATTTCAAGGAGGCATTATTGCAATTGCTTCAATCAAATGTCAATAATGGCAACAACAACAACAGTAACTTTTCACCAACCGGCCTCTTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCACCGGTTCTGCAGTTTGCAAATTTCACTTCCAACCAAGCATTGCTCGAAGTTGTAGAAGGTTACGATCAAATTCACATAATAGATTTCGATATTGGTTTTGGTGGACAATGGTCTTCTTTTATGCAGGAGTTAGCACTCAGGAACGGTGGTGCACCTGCACTTAAGATCACTGCATTTGTTTCTCCCTCTCACCACGACGAAATTGAGCTTAGTTTCACTCACGAGAATCTGAAACAATATGCTGGTGAAATTAACATGTCATTTGAGCTCGAGATTCTGACACTTGAGTCTTTGAATTCTGCTTCATGGCCTCAGCAACTTCGTGATTGCGAAGCAGTTATTGTTAACTTGCCTATTTGCTCATTCACAAATTACCCTTCATACCTTCCTTTGGTGCTTCGATTTGTGAAACAGCTCATGCCGAAAATAGTGGTGACATTGGATAGAAGTTGTGACCGAACTGATGCAACATTTCCTCAGCATATGATCTATGCACTCCAGTCTTATTCTGGTTTGCTCGAGTCACTTGATGCTGTTGGTGTTAATGTTCACCCGGATGTGCTTCAGATGATCGAGAAATACTATCTTCAACCAGCAGTTGAGAAGCTGGTTTCGGGTCGTCTACATTCACAGGACCGAACACTTCCTTGGAAAAACCTACTCTTGTCAGCAGGGTTCTCGCCGTTAACGTTCAGTAACTTCACCGAGTCACAAGCAGAGTGTTTGGTGCAAAGGATTCCTGGTAGGGGATTTCATGTGGAGAAGAAGCAGAATTCACTTGTTTTGTGTTGGCAAAGGAAGGATCTCATCTCGGTTTCGACTTGGAGATGCTGA 2244 0.4118 MKAMPLSFEEYIGKGVLDFGSSVVVGSSDSLFFHQQQEQFLQRWRENCCYAGIEPNSVLVFDHKKPNQETTPTSSSTLSSSHGSAAGAGATGGSTDSTTGGASAAANTKNNILQQSKGRCGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLQVGTSNSHSQQDVEFNGFSFMDQQSSVLDPISSNVNNNTNFVTSIDSSSVVATTTTTIAAEICSDFPFGRVMNQNPNFNSSQQVSLSQGGLFHHQQHQQQQIQSLDEKLPQFVMNQNQAQFMPNPSLVFPFTYSQLQENQEINHQPPAKRLNCGTNYEIPKIPFLDSGQEMFLRRQQQQQQQHQQQLQLLPHHLQQRPMAPKQKMGNPGSGGGEDVSTHQFQQAIIDQLYKAAELIDAGNPELAHGILARLNHQISPIGKPFQRAAFYFKEALLQLLQSNVNNGNNNNSNFSPTGLLLKIGAYKSFSEISPVLQFANFTSNQALLEVVEGYDQIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIELSFTHENLKQYAGEINMSFELEILTLESLNSASWPQQLRDCEAVIVNLPICSFTNYPSYLPLVLRFVKQLMPKIVVTLDRSCDRTDATFPQHMIYALQSYSGLLESLDAVGVNVHPDVLQMIEKYYLQPAVEKLVSGRLHSQDRTLPWKNLLLSAGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWQRKDLISVSTWRC 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00936 747 MobiDBLite consensus disorder prediction 357 376 - -
Trre14g00936 747 MobiDBLite consensus disorder prediction 64 117 - -
Trre14g00936 747 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 334 742 IPR005202 -
Trre14g00936 747 Pfam GRAS domain family 386 746 IPR005202 -
Trre14g00936 747 ProSiteProfiles GRAS family profile. 376 746 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00936 Trre-Chr14 7893830 7896073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00936 361 747 GRAS Transcription Factor Family AT4G00150 55.385 3.35e-136 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre14g00936 GRAS 5.5e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00936 - - gmx:100805945 872.848