Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00919 ATGGCGAAGATTCATGGATTTAAGCTTGGGAGGCGCTTTGTCCGGTTTTCTAGATATGTCTTTAAAAACAAACGAATATTCCGACCTAGATATCATCGCTTTGATTGTTCTTCCGAGTCTCCAACACTAAAGATTCTCAAGTGGGGTCGTAAGCTTACAAAAGGCGCCATGTCACTTTTTAACAAGTCGGGTTATGCCCGGTTAGGATCCGACTCAAAATTCAGCGTGCCGAAGGGACACATGGTTGTGTATGTGGGACGGAAAGAGGAAGAGATAAATAGGGTTATGGTGCCGGTGATATACTTTAACCATCCGTTGTTTGGTGAATTGCTTAGACAAGTTGAGGAGGAGTATGGGTTCAACCACCAAGGGGGAATCACGATACCATGCCGGTTCACAGAGTTTGAACGGGTCAAGACATGGATTGCATCAGGATCCGATAATTGCACCGGTTGA 456 0.4518 MAKIHGFKLGRRFVRFSRYVFKNKRIFRPRYHRFDCSSESPTLKILKWGRKLTKGAMSLFNKSGYARLGSDSKFSVPKGHMVVYVGRKEEEINRVMVPVIYFNHPLFGELLRQVEEEYGFNHQGGITIPCRFTEFERVKTWIASGSDNCTG 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00919 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 61 137 IPR003676 GO:0009733
Trre14g00919 151 Pfam Auxin responsive protein 67 139 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00919 Trre-Chr14 7777186 7777641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00919 75 135 Calmodulin-binding Proteins AT3G43120 47.541 8.32e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00919 K14488 - mtr:25480991 243.432