Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00918 ATGGCACCTCTATACCTAACAATCATGATAATTTTCCTCTCTATCTCTTCATCTCTTGCAAGAGTCGAGCCATCTTTGGCTCGACATAAGTCGCAAAAATCCTCAAACCAAACAAAAACTGAAATAGAAACACAAGCCCAAACCCGCAACAAAACACTGGCATACATAGAGTCCTCGTGCCAAGGAACACGATACCCAGATCTATGCATGCGGTCCTTAGCCTCGTTCGCTAAATACTCCACCATAGACGGACCTGACCACTTAGCCCACATAGCCCTATCCGTAAGCCTAGTCAAAGCACTTCAAACAAGAGCGATAGCGTTGATCAACTTAAGCCAAGCAATTAAAGAGCTTCGCCGGGTAAACAAAGGTACAATTATTGATGATAAAATGTTGTGGCATATAAGTAACGTCGAGACATGGGTGAGTACTGCTTTAACCGATGCGAGCTATTGTGTGCAATCGTTTCCCGGCCATAGGATGAGTAAGAGGACTGCTACTATAAAGAGTAAGGCACAAAATGTTGCTGAGGTTACTAGTAATGGTCTTGCCTTGTTCCATAGGTATGCTGCTAGGTACAAAGCAGCAGCTGCTGCTAGAGCTGCCAAGAGACCATAA 618 0.4434 MAPLYLTIMIIFLSISSSLARVEPSLARHKSQKSSNQTKTEIETQAQTRNKTLAYIESSCQGTRYPDLCMRSLASFAKYSTIDGPDHLAHIALSVSLVKALQTRAIALINLSQAIKELRRVNKGTIIDDKMLWHISNVETWVSTALTDASYCVQSFPGHRMSKRTATIKSKAQNVAEVTSNGLALFHRYAARYKAAAAARAAKRP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00918 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 185 - -
Trre14g00918 205 SMART PMEI_2 51 185 IPR006501 GO:0004857
Trre14g00918 205 Pfam Plant invertase/pectin methylesterase inhibitor 55 185 IPR006501 GO:0004857
Trre14g00918 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 188 IPR035513 -
Trre14g00918 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 107 IPR035513 -
Trre14g00918 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 108 189 IPR035513 -
Trre14g00918 205 CDD PMEI-like_3 58 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00918 Trre-Chr14 7769736 7770453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00918 48 186 Carbohydrate Esterase AT5G53370 26.543 6.17e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00918 - - tpra:123890145 299.671