Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00913 ATGTCTGAAGCCTTGAACAGGGAATTTTCCAAATGTGCGATCAATGGTGATGTTATGCCTGAGCCTCCAGTAATTTGCTGGAAACAAACTATTAAGAAAAATGAGGTCGACGGAAACAGTGTCATAGAAATCCCTGATCGAGTTGTAGCTCAATGTTTGAAGGATCCGAAAAAAATAATATTGACTGATGAACAAAATGAAAAGTCATATGATTGTGATATTGAAACCGGTGCTGGTGAAGGTGAAGGTAGTGGGAAATTTATTGAAAAAGGTTGGTTAAAATGTATGGAAGAAATGGGTTTAAAAGACGGTGATGAGGTGGTTTTCACTGTGGAGAATTCGTCAGGGGTGCTGTATGTTTATCTTTTGGAATGGTGTGATTAA 384 0.3802 MSEALNREFSKCAINGDVMPEPPVICWKQTIKKNEVDGNSVIEIPDRVVAQCLKDPKKIILTDEQNEKSYDCDIETGAGEGEGSGKFIEKGWLKCMEEMGLKDGDEVVFTVENSSGVLYVYLLEWCD 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00913 127 Gene3D - 16 125 IPR015300 -
Trre14g00913 127 SUPERFAMILY DNA-binding pseudobarrel domain 22 118 IPR015300 -
Trre14g00913 127 ProSiteProfiles B3 DNA-binding domain profile. 27 126 IPR003340 GO:0003677
Trre14g00913 127 Pfam B3 DNA binding domain 32 122 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00913 Trre-Chr14 7749891 7750447 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre14g00913 B3 1.9e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00913 - K24692 tpra:123898894 86.2705